Gene
| Gene Model ID | pfu_aug1.0_4932.1_38021 |
|---|---|
| Locus | scaffold4932.1 : 11926 ... 28024 : + |
| To GenomeBrowser | scaffold4932.1:11926..28024 |
| Genes list of scaffold | scaffold4932.1 |
| Synonym | pfu_aug2.0_470.1_00782 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4932.1_38021.t1 | 1 | 1 | Dynamin_N | 3 | 60 | 1.7e-08 | 34.4 | 1.5e-11 | 5.5e-08 | 32.8 |
| pfu_aug1.0_4932.1_38021.t1 | 2 | 1 | Dynamin_M | 58 | 137 | 1.1e-14 | 53.9 | 2.9e-18 | 1.1e-14 | 53.9 |
| pfu_aug1.0_4932.1_38021.t1 | 1 | 1 | PH | 144 | 241 | 4.5e-10 | 39.6 | 1.2e-13 | 4.5e-10 | 39.6 |
| pfu_aug1.0_4932.1_38021.t1 | 1 | 1 | GED | 271 | 360 | 6.1e-23 | 80.5 | 3.1e-26 | 1.1e-22 | 79.6 |
| pfu_aug1.0_4932.1_38021.t1 | 2 | 2 | Dynamin_M | 283 | 295 | 1.1e-14 | 53.9 | 0.39 | 1400.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4932.1_38021.t1 | gi|350424406|ref|XP_003493785.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4932.1_38021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4932.1_38021.t1 atgaccaaggtccctgtgggtgaccagccggtagatatcgagacacaaatccgttccatgttgatggaatttatcaccaa ggacagttgtcttatcttggcagtatcccccgcaaactcagatctggccaactctgatgctctcaaaatagcaaaagaag tagatccacaagaccttgtcgttacggaactcacaaatgtcgtcagaacctgtacagataagatgaacaggtaccctcgg ctccgagaggaggtagagaggatcgttaatacacgtgtacgtgagagagagtccaaggccaaggatcagttactattatt agtggaattccagttatcatacatgaatacaaatcacgaggattttataggatttgcaaatgcccaaaacaagacagaga atagtcaaaggaaaaaagttggaaatcaggtgataaggaaaggttggctcaacctccataacatcagcttcattaaagga ggatctaaggatttctggtttgtcctcactgcagaaacactgtcttggttcaaagatgaagaggaaaaagaaaagaaatt catgctgccacttgatggcctcaaaataaaagacttggaaagcggtatattcactaaacactgttttgcattgttcaatc ccgaatcgagaaatgtatacaaggattataaacagctagaactgtcagcagaaagtcaggaggatgttgacagctggaaa gcttcattcctgagggcaggggtgtacccagacagaggggatgatccgggagaaaaggcaaaggatgagaatgtgtctat ggaccctcaactggaaagacaagtggagacaatacgtaaccttgtggactcctacatgaaaattgtcaacaaaacgcagc gtgatctagtcccaaaaaccatcatgttcctcatcgtcaatgatttgaaagaattcatcggagcagaattgcttgcacaa ttatattcatctgtagaccagagcactgtgatggaggaatcaccggaggaagctcaacgacgagaggacatcctccgtat gtatcatgtgaccaaggaggccctgtcaattattggtgatgtttccatgacgacagtgtctaccccggtaccacccccgg tagacgacgagtggctcaaagtagatcaatcgtcacataatggtctgaagaattatgcttatcatatacctacttcctgt agttctacacgttgtacatgtaagcagcgttcatctcctgataatgacagagatactgctaactgtaaaaatgacgacat caaaaaacctagtaatgacgtaacgtcatttttagctcaccgggacgaaaaagtccggagagctaatgccataccctcgg cgtcgttgccgttgtcgtcgtccgtagacaaaactttaacctgggctatatctcttgaactataa |
|
Protein
| Protein ID | pfu_aug1.0_4932.1_38021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4932.1_38021.t1 MTKVPVGDQPVDIETQIRSMLMEFITKDSCLILAVSPANSDLANSDALKIAKEVDPQDLVVTELTNVVRTCTDKMNRYPR LREEVERIVNTRVRERESKAKDQLLLLVEFQLSYMNTNHEDFIGFANAQNKTENSQRKKVGNQVIRKGWLNLHNISFIKG GSKDFWFVLTAETLSWFKDEEEKEKKFMLPLDGLKIKDLESGIFTKHCFALFNPESRNVYKDYKQLELSAESQEDVDSWK ASFLRAGVYPDRGDDPGEKAKDENVSMDPQLERQVETIRNLVDSYMKIVNKTQRDLVPKTIMFLIVNDLKEFIGAELLAQ LYSSVDQSTVMEESPEEAQRREDILRMYHVTKEALSIIGDVSMTTVSTPVPPPVDDEWLKVDQSSHNGLKNYAYHIPTSC SSTRCTCKQRSSPDNDRDTANCKNDDIKKPSNDVTSFLAHRDEKVRRANAIPSASLPLSSSVDKTLTWAISLEL |
|