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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4932.1_38024
Locus scaffold4932.1 : 68516 ... 99377 : +
To GenomeBrowser scaffold4932.1:68516..99377
Genes list of scaffold scaffold4932.1
Synonym pfu_aug2.0_1267.1_24828

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_4932.1_38024.t1 gi|301624111|ref|XP_002941352.1| 2.0e-37

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_4932.1_38024.t1
Definition-
>pfu_aug1.0_4932.1_38024.t1
atgagtaagcttaactcccaactcgacgaagaactcgctgtcaagcaagaccgagtacagaaaactgaggaccgtttaaa
gcggcttacagatgatctcatgggaacagagaggaagttgctacaagcaacgaaggatctgaaacgtatgggtgacatca
ctgacaaagacgatgttaaagttcagcttcgacaaagactggccaagaaaatgcaattggtcaatgagttacgagacagt
gctacccagatcgaggaagaaatcgacaagactcgtagttccatgcatcagaataaaatggacgtgtctagaattaaggg
ccagctggagagacttgatcctaaagatcctaaatacaaacgtttgtatgctgagatggtagataaagaacaacagatca
gtgagagtaatcagatgtacggacaactacaacaacagttagaagtcatgttagataccatcgccagggaaacggacgac
atcaaaaaactagaacaacagctgaatgatggtaagtcacagttagaagtcatgttagataccatagccagggaaacgga
cgacatcaaaaaactagaacaacagctgaatgatgaagtcatgttagataccatcgtcagggatacggacgacatcaaaa
aactggaacaacagctgaatgatgatcgagtagagagtaatgagtctctacgccaggagctggacgatatcgtaggtggg
ttacagggctacctggccagtgtcaaacagaaaggtctgaagtcacagagagactttgagagtttgttaggagagaaggc
gtcactagaggagaaagtacgatctctggaacaggagcttagcgtactggatagtgaagctggcagagctcatagtatgg
aaatgcgtgtaaaagaactggaggacaccatatctagacaacaggaccataacagaactctagaggaccagattaacaag
tcccgcgcaaaagacgtggaataccaggatcgtatggaaagtacgtcacatgagctacaggccatgaaaagtgcacttag
ggacaccgaacgtaaagtacagaatgagaagatgactttagaaagacaagtacagacagagagggagaaggcacagcaag
ctataagagatgccaaggccaaatctgctctagaggatgaggtcaggaggttacaaggtcaaattgaaggtcaaaagcaa
caaattgatgaggagagacggaagctaaatgagtccatacctcaacatgatctgaagagaagactgagagaactgtcaca
aagtgttaaagctggcaggagtccaatcagtccacagagtgacagagattttgtcggtaaaactttccgagacctgcagc
aatacatcaatgatagtatgaacaagagtatgaatgacatggaacagatcaaacatacgaccagccagccactacaagga
gtaccagcaaatgctgagatacagacgttacgtgaaaacttacaacaagcagaagacaaattacataaacaggagaaaaa
ggagaaaaataaggaaagcaagatggaggcagaaaggaaggctgtatcagatgaactgagaaaacgtgacaatgagatac
agaaacttaaggcgttacttaaggaggaacaaaataaggcagctcagggaagacctgtgttcaaaattgtacatcgtcca
gattccgagtcagatcgtagctcattgaactctgaagaaaaagctctgtacgatgaactacaaaaagaactgctggaact
aaggcgtagtatgagatctaaagaacaggaaaatgctaaacggcttgcggatgcagagaatgaggcagcgttactagaac
agatggtgaaagaacaagaagatgagttgatgagaacacgagaggaaaatgaattagagagagagaagaatgaggctcgt
atgcaggtaatagctcaggatttggaccaggctaaacacacggccgatatgttacaaaatacattagacgagagagatcg
taatctacatcaacaactcaaccacgctgatatgaacaatcagatgatcacggcacaagaagaggagctaacaaaacttt
acgatatacttgaggcccagaaagacgagataggacacctgaatgtattactagatcagctggctaatcaaggagggggt
ggatcagttgccccagctccaggatttgacgacgagttgtggcgtttaagacaggaagttaacagactgaaggaaaccct
agcaatgcagtcagcatacgtacagattgctggttcagtaggcattgacgcatcccagcctcgtggtatactgaaaaacg
ccgatacacagatgggagacgatacttacctcttctgtaacgtcccagaacaccatgatctggaggactacatagcagaa
ttacaggagaaacttaaacgtctgaagacaaagttgttacaagaacaggagcttcaaagagaggctgaattagaagatga
cagccgattggtcagaagattgagaggggagttagaggcaagagagactgtaagccagtatgatagcgcacaaaacaatc
tacgtagcaccgtacaggaaactaacgagctagaacgacgagcaaacgaggcaggcgtagaactggttaaggcagcagat
acactcagtgcaataaggtcagaggtcaaggacatggagaagaagaaatccaaacaagagaggcttctaagggacataaa
tcaggtcatcaataagagagattccgagtacaaggatctggataacagagtcagatcagctacacagaatctacacagaa
tgcgggcagagttagactccacacagcagagagagaaagaaacggtggcagccttacatgacgcagaggaagttctggct
aaacggagaggagaaatagctcgcatgagagatcaggttagcggggaacattcacttctaaaatataaaaaccttctctt
tgccattctacatgtattttcttaa

Protein
Protein IDpfu_aug1.0_4932.1_38024.t1
Definition-
>pfu_aug1.0_4932.1_38024.t1
MSKLNSQLDEELAVKQDRVQKTEDRLKRLTDDLMGTERKLLQATKDLKRMGDITDKDDVKVQLRQRLAKKMQLVNELRDS
ATQIEEEIDKTRSSMHQNKMDVSRIKGQLERLDPKDPKYKRLYAEMVDKEQQISESNQMYGQLQQQLEVMLDTIARETDD
IKKLEQQLNDGKSQLEVMLDTIARETDDIKKLEQQLNDEVMLDTIVRDTDDIKKLEQQLNDDRVESNESLRQELDDIVGG
LQGYLASVKQKGLKSQRDFESLLGEKASLEEKVRSLEQELSVLDSEAGRAHSMEMRVKELEDTISRQQDHNRTLEDQINK
SRAKDVEYQDRMESTSHELQAMKSALRDTERKVQNEKMTLERQVQTEREKAQQAIRDAKAKSALEDEVRRLQGQIEGQKQ
QIDEERRKLNESIPQHDLKRRLRELSQSVKAGRSPISPQSDRDFVGKTFRDLQQYINDSMNKSMNDMEQIKHTTSQPLQG
VPANAEIQTLRENLQQAEDKLHKQEKKEKNKESKMEAERKAVSDELRKRDNEIQKLKALLKEEQNKAAQGRPVFKIVHRP
DSESDRSSLNSEEKALYDELQKELLELRRSMRSKEQENAKRLADAENEAALLEQMVKEQEDELMRTREENELEREKNEAR
MQVIAQDLDQAKHTADMLQNTLDERDRNLHQQLNHADMNNQMITAQEEELTKLYDILEAQKDEIGHLNVLLDQLANQGGG
GSVAPAPGFDDELWRLRQEVNRLKETLAMQSAYVQIAGSVGIDASQPRGILKNADTQMGDDTYLFCNVPEHHDLEDYIAE
LQEKLKRLKTKLLQEQELQREAELEDDSRLVRRLRGELEARETVSQYDSAQNNLRSTVQETNELERRANEAGVELVKAAD
TLSAIRSEVKDMEKKKSKQERLLRDINQVINKRDSEYKDLDNRVRSATQNLHRMRAELDSTQQREKETVAALHDAEEVLA
KRRGEIARMRDQVSGEHSLLKYKNLLFAILHVFS

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