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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4936.1_30824
Locus scaffold4936.1 : 11867 ... 20245 : -
To GenomeBrowser scaffold4936.1:11867..20245
Genes list of scaffold scaffold4936.1
Synonym pfu_aug2.0_4.1_13328

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_4936.1_30824.t1
Definition-
>pfu_aug1.0_4936.1_30824.t1
atgctagggattccatgtgtaatcatcaatggaatgacaaagagtgcagcttacgagatagggtccaaaatcaacagaga
aaacatgggagctcaatggaacgcaatttacttgaaaggaggctggaggtttatagacgcattctgggcctctgcttgtg
tggttggcaggaaatcaaaggactggaagatggtggactccgaaggtaactatgtagatgaggatgaagaagatgaaggt
actacggaacacacagtgaacgaattttatttcatgactgatcccgagaaattcatatggacccactttcctgatgacgt
tgaatggcaactcatggagaagacgatatcagagagagattttgaggaacatgtgtacatacgcgagaggttttactcaa
tgggaatcaagattgaggacaagaaactgtataaacaaatccttattccaaccggaggggaggtgcacatacagttaggg
ataccgtcagaccggagcaaagactatcagttcaaatacatgatgtaccggaacaaaaccgacgaagactttagtaggcg
actattgctggacaaatttgttctgatggagcatacaaatacacatttaaaactttctcttaggttccctctcaagggca
agtacaagctcgatgtgtacggcatggatgagactaaaacgtctgactttgatttgatatgttcctatgtcgttgaatgt
acggaacctaagaagaattgtttgcccctccccgacacacccgccatcggctggggcccgggacaagaaacgcgggaagc
tggaatccttcctaaatctcatcaaggcgccatcattgttacagaggatggacgagtggacatcaaacttggcgccaaca
aggccgtggaaatacaccagctcctaaagagcatcaacatcgacgaggcaacactcagcaagtacgctgtggtcagagag
gagaatggagagcatttcattcatctacgtcttccccaaggaggagagtacgcattgaaggtatatgctaatgatgaagg
gaaagagggtaatgcagcaaatgttctgaactaccttatccgatgttccaatgaaaacgttgaaaatactccgtttccaa
acattcctgatggcattcttggcaaaaaggttattgcagacgagataggtgtggaagctcgaatcaaaaagggacgattt
aaaacgaaggacggaagaatccgattagagttcgcggcaatgagtcatgtggagatactcatggaaatacacactcaaga
cgctgtagcactgaaataccttagagcataccgtcaggccatcgataatagatgggttttcgatatagacttacctgtta
aaggtgaatactcaatcaatgtgttcgcccgcgagaacgagaaaagaatccgtatctacaatgtacactcttatctagta
ttttctgatggacatgcatacagagaagacaaacggacacctggtacccctcctaaagtattgtctgaaacggtgtccac
atctgagaatgaggtccttatacccgttccgagtggctatgaccgtgtggtagcttgtcttcagcgtcgtcatgccaacg
accctcccgatagtgcgcagattgaggtcatagaacatgacaacaacaaattactactcaccgacttacccgagttcggc
gagtatcttatgaacatttacgaagtcgacgagtacgggatgatgaccaatattgcacggtatggcatgaacaggaagac
cactactgaactgttacacgacgatccaagaacgatcatggaacgaattaacgaagaaagggaagatgaagacgaaacag
aatctcagacacgagaagccaatgaaacaggtgctactatagacatggtgcgcaagcgcagaagaattttaatgctcaag
agaagagcaatggaactaggcgacaaagaggctctcgaacagcttgtcaaggcctatgaggagaccaaaccaccggaaga
cgatccaacgttggtggcggcaaagaaactccttaacctactgaatgctaaagatgagctttcagcggcgtcgagaacac
ggcatttggagaaactgaaaaacgctatcaagcgtgccaaggaggccaattacgatggaatactcaaccttcaaatagta
acagccgaaagactgaaagagaaactagtaaggatagagaagctgagacacaatatcctcgtcatggaccagagtacggc
ggccgaactcagaacctatacccatccaccagatggcgtgagacagtccatcatggctgtccttatgctcctagagtatc
caaagagagatgttaaggattggaaggcgtgccagaacattctatcacgaactggaaaggaatcgttgatgcgacgtgtg
gccatgtttgatcccaagtactgtttcttagatatcgctctaggagccaagaaagttatagaacctttcagtttagagga
aatcagagacgtcagcaacggggctgctgctttctataattgggcaagtggtatgataaaggaggtagaatccacaggag
gagccagccgtcccatggatgagtggatgagggtgacagaggacgtgcagggagtggaggaaagggtgtcactaggcccg
gcttcggccaggagtaggaagatagagagacagtcacagctcggggaggcgcccatgagaatgaacacacaactctccat
taacaggacgtatactctgccatcacagaacggtcagagataa

Protein
Protein IDpfu_aug1.0_4936.1_30824.t1
Definition-
>pfu_aug1.0_4936.1_30824.t1
MLGIPCVIINGMTKSAAYEIGSKINRENMGAQWNAIYLKGGWRFIDAFWASACVVGRKSKDWKMVDSEGNYVDEDEEDEG
TTEHTVNEFYFMTDPEKFIWTHFPDDVEWQLMEKTISERDFEEHVYIRERFYSMGIKIEDKKLYKQILIPTGGEVHIQLG
IPSDRSKDYQFKYMMYRNKTDEDFSRRLLLDKFVLMEHTNTHLKLSLRFPLKGKYKLDVYGMDETKTSDFDLICSYVVEC
TEPKKNCLPLPDTPAIGWGPGQETREAGILPKSHQGAIIVTEDGRVDIKLGANKAVEIHQLLKSINIDEATLSKYAVVRE
ENGEHFIHLRLPQGGEYALKVYANDEGKEGNAANVLNYLIRCSNENVENTPFPNIPDGILGKKVIADEIGVEARIKKGRF
KTKDGRIRLEFAAMSHVEILMEIHTQDAVALKYLRAYRQAIDNRWVFDIDLPVKGEYSINVFARENEKRIRIYNVHSYLV
FSDGHAYREDKRTPGTPPKVLSETVSTSENEVLIPVPSGYDRVVACLQRRHANDPPDSAQIEVIEHDNNKLLLTDLPEFG
EYLMNIYEVDEYGMMTNIARYGMNRKTTTELLHDDPRTIMERINEEREDEDETESQTREANETGATIDMVRKRRRILMLK
RRAMELGDKEALEQLVKAYEETKPPEDDPTLVAAKKLLNLLNAKDELSAASRTRHLEKLKNAIKRAKEANYDGILNLQIV
TAERLKEKLVRIEKLRHNILVMDQSTAAELRTYTHPPDGVRQSIMAVLMLLEYPKRDVKDWKACQNILSRTGKESLMRRV
AMFDPKYCFLDIALGAKKVIEPFSLEEIRDVSNGAAAFYNWASGMIKEVESTGGASRPMDEWMRVTEDVQGVEERVSLGP
ASARSRKIERQSQLGEAPMRMNTQLSINRTYTLPSQNGQR

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