Gene
| Gene Model ID | pfu_aug1.0_4940.1_38028 |
|---|---|
| Locus | scaffold4940.1 : 43476 ... 48064 : + |
| To GenomeBrowser | scaffold4940.1:43476..48064 |
| Genes list of scaffold | scaffold4940.1 |
| Synonym | pfu_aug2.0_380.1_00674 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4940.1_38028.t1 | 1 | 1 | TF_AP-2 | 158 | 365 | 0.0 | 269.5 | 0.0 | 0.0 | 269.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4940.1_38028.t1 | gi|269785095|ref|NP_001161503.1| | transcription factor AP-2 beta [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4940.1_38028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4940.1_38028.t1 atgtcagattttcagccaccctattttccacctccctttcagcaaccatctaccattgactaccaccagcaaccagtgca gccactgccacaaccacccagccactttgccaccagtgatggctaccagtatatggggatgtttactcagcaaccggttg cggcaccagattataatcagggcctagattttgatagggtgcatgagtaccataaagctggtggggctataatacgacca gagccccagctggcaggtcaaggacattcacacatatatgacaaccaaggtcaaggtcatcacttgactggattgccgcc acaacaactgatactaaatggtgaatctaatgagatggactatgaggacaaatatatgtctggagatattctgaacggta gtgtagagaaaccattgataccccataaagacaacaagcgtgacatggtaattcaagggcgggcaactcctgccgatgtg ttttgtctggttgatgggagactttccttattgagcagttcttcaaagtataaggttaccattgctgaaattcagaggag gttatctccccctgagtgtttgaatgcttctctactagggggagtcttaagacgtgccaagtctaaggatggaggacgca ccttaagggaaaaattagacaacattgggctaagtttacctgcaggacggaggaaggctacacaagtaacgttatttaca tcactagtggagggggaatcagtacggctagctagggattatggatatgtttgtgagacagagtttcccactaagcaatg tgcggaatataatggcagacagtatggcactacaactcaacaggagaaaatggcacggaaaaactcgatactagctgcga aacaaatattgaaggaattcatggatttaatgaacaaggacagatcgcctttagggaactcgatgccgccgcacatactg gaatcggaagtacagcgccacctgactcacttcagcatgatcacgcacggcttcggaggcccagccatagttgcttccct tgccatagtgcagaactaccttacagagatgatgaaaatgctagagaaaggttacccagacaacagcgcaaaacgcaaga agtaa |
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Protein
| Protein ID | pfu_aug1.0_4940.1_38028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4940.1_38028.t1 MSDFQPPYFPPPFQQPSTIDYHQQPVQPLPQPPSHFATSDGYQYMGMFTQQPVAAPDYNQGLDFDRVHEYHKAGGAIIRP EPQLAGQGHSHIYDNQGQGHHLTGLPPQQLILNGESNEMDYEDKYMSGDILNGSVEKPLIPHKDNKRDMVIQGRATPADV FCLVDGRLSLLSSSSKYKVTIAEIQRRLSPPECLNASLLGGVLRRAKSKDGGRTLREKLDNIGLSLPAGRRKATQVTLFT SLVEGESVRLARDYGYVCETEFPTKQCAEYNGRQYGTTTQQEKMARKNSILAAKQILKEFMDLMNKDRSPLGNSMPPHIL ESEVQRHLTHFSMITHGFGGPAIVASLAIVQNYLTEMMKMLEKGYPDNSAKRKK |
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