Gene
| Gene Model ID | pfu_aug1.0_4946.1_59664 |
|---|---|
| Locus | scaffold4946.1 : 216 ... 8571 : + |
| To GenomeBrowser | scaffold4946.1:216..8571 |
| Genes list of scaffold | scaffold4946.1 |
| Synonym | pfu_aug2.0_12.1_06749 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4946.1_59664.t1 | 2 | 1 | GSHPx | 42 | 63 | 5.8e-06 | 25.6 | 0.0092 | 68.0 | 2.8 |
| pfu_aug1.0_4946.1_59664.t1 | 2 | 2 | GSHPx | 60 | 100 | 5.8e-06 | 25.6 | 3.3e-09 | 2.5e-05 | 23.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4946.1_59664.t1 | gi|327271165|ref|XP_003220358.1| | PREDICTED: LOW QUALITY PROTEIN: glutathione peroxidase 7 [Anolis carolinensis] | 4.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_4946.1_59664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4946.1_59664.t1 atgtcagtctatggttcaaagactaaaattggaatcttttactttagtttcttggtaacgtcattggccaaaatactagt tttagcagaagcatctgacgaaagtgaaagtagaactagaagtttcttcgatttcgttgctgtagacatcgatgataaaa tactcagtttgagacaatacgagggaaagactaataaggaaatcaaagactttgcagaaaagacatatggagtaaatttc ccaatgtattccaaaataaatgtcataaatgacaatgtgccagacttttggacatttctaactgatgaagctaaagctgt acctaactggaatttttggaagtatctggttgacaagaaaggaaaggtagatgatattgcattatcatacatcatcggca gtctgaaaatgtttacatgttcttaa |
|
Protein
| Protein ID | pfu_aug1.0_4946.1_59664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4946.1_59664.t1 MSVYGSKTKIGIFYFSFLVTSLAKILVLAEASDESESRTRSFFDFVAVDIDDKILSLRQYEGKTNKEIKDFAEKTYGVNF PMYSKINVINDNVPDFWTFLTDEAKAVPNWNFWKYLVDKKGKVDDIALSYIIGSLKMFTCS |
|