Gene
| Gene Model ID | pfu_aug1.0_4955.1_67098 |
|---|---|
| Locus | scaffold4955.1 : 321 ... 10038 : + |
| To GenomeBrowser | scaffold4955.1:321..10038 |
| Genes list of scaffold | scaffold4955.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4955.1_67098.t2 | 1 | 1 | DC_STAMP | 92 | 282 | 0.0 | 177.2 | 0.0 | 0.0 | 176.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4955.1_67098.t2 | gi|115655412|ref|XP_795449.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4955.1_67098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4955.1_67098.t1 atgttttctgtaattgaagcgtatgaaccttcaaagaaaggtgatttgaaattgaacatcggcgacaaagttgacaaggt gaaggatatcggcaatggttgggtgataggacgcaatgtcaatacgaggaaaaaaggttcatttccagaggactacatag accgtaatacctcaatcacgggagctctggttcgtcgattcaccaatagatccaggtctgtcaaaccaactaaagatgca aggataaatgttatagaaaacgaattgcaagaagacgatacgaataaagaatcaagcgaagatttaacatgttctgtgga gggaaatcaaaacgacgggattgaaatcgggaacactaacgatgttgcggaactcgaacaaagtggtgatactgaaacac aaggaaccagaagattccgttgcctgtgtcgtgttctgatcagaatattatctgctgttgtcgccggtggaattgtgttt gcactgttggtgtacagtttttctgtcgacattcttatgggaagctacatcggcgggggtgtattcatatttctgttttt cggactgattttttctgcgtttatcagatgcgtcgttttgatcatggttccaaatatgttcaccaagagaggtaaagcta ttcttttgtcagtcatcaccggactcttgctttctggtccggccatgaacgtttctcataacactgaagaagtaggccag agtctgggatgtaccgcggaattgatctacaatcaaacacagatgcttcgcaaacaactagaggaaccaataaaggcact caaacaacaacttatcgagtacatgaaaagtctggaaaattttcttcagaaaatatatatagcactggaacccattttca cggcgataagagcattttcaaaagctttgaaatctgctgtagacgctgtcatgagtctggcgagaaaatgtaaagcggtg cttggcgaggcgggacgaaaatgtaacgagggcaatgatgaagtgaaacgaaaatgtaaagatgccatggataaagcgga cccaacctccaaagtgaaagatgttggtaacaaaattaaagacgttttcggcggctggggaaggaggaaaagatccagca ctaattcctcattaattagtcatactgaaatcaggcatctcgtcagacgtggtgttctcaacaaagtatgtaggatattt gaccttggcagtggagtgtgcagttttgtaaatgctttctccgccctatgtagtcctatagattggctgtctaaagcaat gggaaatgtcgccgatacaatattgaacggtctcaacaaggtcacagaattttttgaattcaaaataaaagatgagtttg atatatctggctccgcaacaagctcgaaaagtgcctcatctattgtcaatgaaataaaggaggatctccttgaaaagact gaattcatacgctacgtcttctctattgtttccaaaatcatgtcagtctccttgattttgttgttcttaagttctctgtc atacgttataagatatcgtacgaagcttgattatgataataaatacatcacccgagcgtttaccgagtacgacgaggaat gcagacaaaaaggcatggagagcgttctccctttacggaagaaggaagccaagaagtatctgttcaccgccactatgaag ttatcaatgtcggaatcgtctagtctcaaaaagtctatagctttcttactctatcacatcattataacgttgattgtcat cagttttgattatatactgtactatgtccttctcctgatagaggagacggctaacgttgccctggtcgttgagggagaga atacgcttgatgttcaagtagaaggaagaggaatcatctccgcgtttgtcagacatatggtgtcttccatgaatctagat tccacatacagtgtgcagttcaatttcaccatatgtcttccaaatccaagagaaccaaagctctccacaaacattctcat tggttcgctgtacgccttggcgattataattcttattctggaggcgtacggatcgcgtttgcggaggaagataacagctt cgttttaccctaaacaagagaaaaacagaatttcatatcttcacgaaaagataatcagcgatcgaattgcgtttgcgtgt ctgatgaaagatcaagtatttcgtaggaggaaggagaatgaggtacggggaaagataacagtaaatggatatttttctcg aaaaggatcatgtatgtctagatgctgtgactgttgcctcccagagaaacgatcatgtcattgctgtgatgtacctgcaa gaaagggtagattatttgtcaaatgtcagaatgaagcatgtaatgccgtgttctgtaaggagtgcttcattgtaatggag ggaacatgccttgtctgcgacaggaagttggaggaacatgttgtataa |
|
| Transcript ID | pfu_aug1.0_4955.1_67098.t2 |
| Definition | - |
>pfu_aug1.0_4955.1_67098.t2 atgggaaatgtcgccgatacaatattgaacggtctcaacaaggtcacagaattttttgaattcaaaataaaagatgagtt tgatatatctggctccgcaacaagctcgaaaagtgcctcatctattgtcaatgaaataaaggaggatctccttgaaaaga ctgaattcatacgctacgtcttctctattgtttccaaaatcatgtcagtctccttgattttgttgttcttaagttctctg tcatacgttataagatatcgtacgaagcttgattatgataataaatacatcacccgagcgtttaccgagtacgacgagga atgcagacaaaaaggcatggagagcgttctccctttacggaagaaggaagccaagaagtatctgttcaccgccactatga agttatcaatgtcggaatcgtctagtctcaaaaagtctatagctttcttactctatcacatcattataacgttgattgtc atcagttttgattatatactgtactatgtccttctcctgatagaggagacggctaacgttgccctggtcgttgagggaga gaatacgcttgatgttcaagtagaaggaagaggaatcatctccgcgtttgtcagacatatggtgtcttccatgaatctag attccacatacagtgtgcagttcaatttcaccatatgtcttccaaatccaagagaaccaaagctctccacaaacattctc attggttcgctgtacgccttggcgattataattcttattctggaggcgtacggatcgcgtttgcggaggaagataacagc ttcgttttaccctaaacaagagaaaaacagaatttcatatcttcacgaaaagataatcagcgatcgaattgcgtttgcgt gtctgatgaaagatcaagtatttcgtaggaggaaggagaatgaggtacggggaaagataacagtaaatggatatttttct cgaaaaggatcatgtatgtctagatgctgtgactgttgcctcccagagaaacgatcatgtcattgctgtgatgtacctgc aagaaagggtagattatttgtcaaatgtcagaatgaagcatgtaatgccgtgttctgtaaggagtgcttcattgtaatgg agggaacatgccttgtctgcgacaggaagttggaggaacatgttgtataa |
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Protein
| Protein ID | pfu_aug1.0_4955.1_67098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4955.1_67098.t1 MFSVIEAYEPSKKGDLKLNIGDKVDKVKDIGNGWVIGRNVNTRKKGSFPEDYIDRNTSITGALVRRFTNRSRSVKPTKDA RINVIENELQEDDTNKESSEDLTCSVEGNQNDGIEIGNTNDVAELEQSGDTETQGTRRFRCLCRVLIRILSAVVAGGIVF ALLVYSFSVDILMGSYIGGGVFIFLFFGLIFSAFIRCVVLIMVPNMFTKRGKAILLSVITGLLLSGPAMNVSHNTEEVGQ SLGCTAELIYNQTQMLRKQLEEPIKALKQQLIEYMKSLENFLQKIYIALEPIFTAIRAFSKALKSAVDAVMSLARKCKAV LGEAGRKCNEGNDEVKRKCKDAMDKADPTSKVKDVGNKIKDVFGGWGRRKRSSTNSSLISHTEIRHLVRRGVLNKVCRIF DLGSGVCSFVNAFSALCSPIDWLSKAMGNVADTILNGLNKVTEFFEFKIKDEFDISGSATSSKSASSIVNEIKEDLLEKT EFIRYVFSIVSKIMSVSLILLFLSSLSYVIRYRTKLDYDNKYITRAFTEYDEECRQKGMESVLPLRKKEAKKYLFTATMK LSMSESSSLKKSIAFLLYHIIITLIVISFDYILYYVLLLIEETANVALVVEGENTLDVQVEGRGIISAFVRHMVSSMNLD STYSVQFNFTICLPNPREPKLSTNILIGSLYALAIIILILEAYGSRLRRKITASFYPKQEKNRISYLHEKIISDRIAFAC LMKDQVFRRRKENEVRGKITVNGYFSRKGSCMSRCCDCCLPEKRSCHCCDVPARKGRLFVKCQNEACNAVFCKECFIVME GTCLVCDRKLEEHVV |
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| Protein ID | pfu_aug1.0_4955.1_67098.t2 |
| Definition | - |
>pfu_aug1.0_4955.1_67098.t2 MGNVADTILNGLNKVTEFFEFKIKDEFDISGSATSSKSASSIVNEIKEDLLEKTEFIRYVFSIVSKIMSVSLILLFLSSL SYVIRYRTKLDYDNKYITRAFTEYDEECRQKGMESVLPLRKKEAKKYLFTATMKLSMSESSSLKKSIAFLLYHIIITLIV ISFDYILYYVLLLIEETANVALVVEGENTLDVQVEGRGIISAFVRHMVSSMNLDSTYSVQFNFTICLPNPREPKLSTNIL IGSLYALAIIILILEAYGSRLRRKITASFYPKQEKNRISYLHEKIISDRIAFACLMKDQVFRRRKENEVRGKITVNGYFS RKGSCMSRCCDCCLPEKRSCHCCDVPARKGRLFVKCQNEACNAVFCKECFIVMEGTCLVCDRKLEEHVV |
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