Gene
| Gene Model ID | pfu_aug1.0_4955.1_67102 |
|---|---|
| Locus | scaffold4955.1 : 30722 ... 43085 : - |
| To GenomeBrowser | scaffold4955.1:30722..43085 |
| Genes list of scaffold | scaffold4955.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4955.1_67102.t2 | 1 | 1 | SH3_9 | 68 | 116 | 4.0e-07 | 29.5 | 2.4e-10 | 7.1e-07 | 28.7 |
| pfu_aug1.0_4955.1_67102.t2 | 1 | 1 | DC_STAMP | 584 | 775 | 1.4013e-43 | 148.7 | 0.0 | 2.60642e-43 | 147.8 |
Transcript
| Transcript ID | pfu_aug1.0_4955.1_67102.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4955.1_67102.t1 atggtcacggccctcgactatgtaactgagtttttcacttttgaagtcgaatcagactttggcctgtccgggacagtgaa ctattccaagaacgcgtcaactgttctgagtgaaatacaaagcgacatattgtccaggattagtggggtgttaagcttta ttacaacaattagtaatgtgttaggcctcaccttgattatcctgtttatcaaatcactgatttacattaaaaaatatcga acaaaggatcactttaacaacattttcatcactaaaggctttgttaggtttgacgacgactgtaagaagaggggagaaga atttgtactgcctctgcattcaagcgaagaagtatacacatacgtcatgacaacaactaagattctttcaccggcggaaa tgaaaaccctgaaaactgacatgaggctcgtattctaccacgtgttgatatctactttcattattggattcgactatatt ttgtattatgcgttagatcttgtgacacagtacgctgatgtggcgttgacggttgaaggaataagcaccatagatgttga gatagaaggcgatggtatattcaccgtcattttacgagcaatggtagacaatttgaacctcaacagcacgttcagtgttg atctgaattttacatgttgcttgccagatccgtcttaccctgacagctcgaacatccccgtcctaattctgctttatatt attgctgccctgtttgtaacgatgcaaggatatggaatgaggctgaggaggaaaatagcctcctctttttatcccgaaca ggaagtttgtaggattcactacctccatgagaaaattatccacaaaaggctgacgttcaaagcttggttaaaagatcata ttttcagcagaaggaaagaaaacgaagttagagagaagaacaacttcagagcctacctagcttacaagtcaccgttcttt tcaaagtacatagaaattatactgccgtcaaggaagtcctgtctaagctgtgataaggtgggtcggagagggatgatctt taagaaatgtgacaataaatcatgcagtgcactgttttgtgaggattgttttaaatttaccaagggccactgcctagttt gtgatacaaagaacgaaataaggaacattcagaatgcatga |
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| Transcript ID | pfu_aug1.0_4955.1_67102.t2 |
| Definition | - |
>pfu_aug1.0_4955.1_67102.t2 atgctttaccttaaaaccattctaacttcgatcctggtatcgcactgtggtttaattccaggacgtcgataccaagaact aaagccgtttgaacttttacaatggaccctatgggaaaagaaagaaaaatccgtttttagagccgtgtttggtttagttc catatatcaaatactactcggacatggcgacatataaagcaatcgtagcacacgaagaaaacaagaaaggggagctaagt atagaaatagatgatgatgttgatcgaattaaagacatcgggaatggatgggttctcggtcgaaacgttcgcactggaaa aacaggactttttcctgaaaattgtttagatagaaataccagtgtaacgggatctattgtgcgtcgcgttagtaagagga aaccaagtttaccatccaagggtccaaaggtacgacttttgttggacaatcttaaggaatctgtttccaataatgtccac ttacctttgaaaaaggcacctgcagaaagccttaagaacagtcgagaagaacaatatagttctagcgaagaagtccctag aaaggatagaaatattgaacgttctgtggattatttgaaatatgaatatgagaagattcagcaacaagtacgtaaagcag ctggtatcaccaaagaaaaggtttctgacatgaactacaaactactgaaaagtgatgaaaatcagtttagactgctgaag actatatggcgaattgttcttgccttatttgcgacaggaatcttgtacatgctactatatttcagttttggattcaatgc ccaagacgccggataccttatcataggaatgtttatatttttcatggtcggtttggtctttttcaaacttattcgatgcg tcatgttactgatggtaccgaatttattcactggcagaggacgggccttatttctttccattatcactggtttactttta gctggccctgctgttaatatcgccaataacacagatgagctgagtacaagtcttggatgtacagcggacttaatctataa ccaaacacaagccttaagaaagcaactggaggaacctctatatgaacttgcccgcaaacttcagagttatatgtacgagc tacgactcatcattgacggacttgcgacagctctagaacccctgaccagcactctcagcgatttctccagtgcggtccag tctgcccttgatgaagtatcagctctttccgacgttagtattacaaaatgtaatgaagttagtcacaaattttcgaaatt ttttttctcgaccattcttacacaatgcgaaagcgacctgacctctgctaaagaaagctgctcttctggaatagattcag caaaatctgactgtgaagacacactggatgccatcgacataacagatgaggcttgggatgaagtggaaggggccattgat tggttcgaggacaatgggcttttcagacagaacaaacttatagaggcatcagaggctatggtcacggccctcgactatgt aactgagtttttcacttttgaagtcgaatcagactttggcctgtccgggacagtgaactattccaagaacgcgtcaactg ttctgagtgaaatacaaagcgacatattgtccaggattagtggggtgttaagctttattacaacaattagtaatgtgtta ggcctcaccttgattatcctgtttatcaaatcactgatttacattaaaaaatatcgaacaaaggatcactttaacaacat tttcatcactaaaggctttgttaggtttgacgacgactgtaagaagaggggagaagaatttgtactgcctctgcattcaa gcgaagaagtatacacatacgtcatgacaacaactaagattctttcaccggcggaaatgaaaaccctgaaaactgacatg aggctcgtattctaccacgtgttgatatctactttcattattggattcgactatattttgtattatgcgttagatcttgt gacacagtacgctgatgtggcgttgacggttgaaggaataagcaccatagatgttgagatagaaggcgatggtatattca ccgtcattttacgagcaatggtagacaatttgaacctcaacagcacgttcagtgttgatctgaattttacatgttgcttg ccagatccgtcttaccctgacagctcgaacatccccgtcctaattctgctttatattattgctgccctgtttgtaacgat gcaaggatatggaatgaggctgaggaggaaaatagcctcctctttttatcccgaacaggaagtttgtaggattcactacc tccatgagaaaattatccacaaaaggctgacgttcaaagcttggttaaaagatcatattttcagcagaaggaaagaaaac gaagttagagagaagaacaacttcagagcctacctagcttacaagtcaccgttcttttcaaagtacatagaaattatact gccgtcaaggaagtcctgtctaagctgtgataaggtgggtcggagagggatgatctttaagaaatgtgacaataaatcat gcagtgcactgttttgtgaggattgttttaaatttaccaagggccactgcctagtttgtgatacaaagaacgaaataagg aacattcagaatgcatga |
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Protein
| Protein ID | pfu_aug1.0_4955.1_67102.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4955.1_67102.t1 MVTALDYVTEFFTFEVESDFGLSGTVNYSKNASTVLSEIQSDILSRISGVLSFITTISNVLGLTLIILFIKSLIYIKKYR TKDHFNNIFITKGFVRFDDDCKKRGEEFVLPLHSSEEVYTYVMTTTKILSPAEMKTLKTDMRLVFYHVLISTFIIGFDYI LYYALDLVTQYADVALTVEGISTIDVEIEGDGIFTVILRAMVDNLNLNSTFSVDLNFTCCLPDPSYPDSSNIPVLILLYI IAALFVTMQGYGMRLRRKIASSFYPEQEVCRIHYLHEKIIHKRLTFKAWLKDHIFSRRKENEVREKNNFRAYLAYKSPFF SKYIEIILPSRKSCLSCDKVGRRGMIFKKCDNKSCSALFCEDCFKFTKGHCLVCDTKNEIRNIQNA |
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| Protein ID | pfu_aug1.0_4955.1_67102.t2 |
| Definition | - |
>pfu_aug1.0_4955.1_67102.t2 MLYLKTILTSILVSHCGLIPGRRYQELKPFELLQWTLWEKKEKSVFRAVFGLVPYIKYYSDMATYKAIVAHEENKKGELS IEIDDDVDRIKDIGNGWVLGRNVRTGKTGLFPENCLDRNTSVTGSIVRRVSKRKPSLPSKGPKVRLLLDNLKESVSNNVH LPLKKAPAESLKNSREEQYSSSEEVPRKDRNIERSVDYLKYEYEKIQQQVRKAAGITKEKVSDMNYKLLKSDENQFRLLK TIWRIVLALFATGILYMLLYFSFGFNAQDAGYLIIGMFIFFMVGLVFFKLIRCVMLLMVPNLFTGRGRALFLSIITGLLL AGPAVNIANNTDELSTSLGCTADLIYNQTQALRKQLEEPLYELARKLQSYMYELRLIIDGLATALEPLTSTLSDFSSAVQ SALDEVSALSDVSITKCNEVSHKFSKFFFSTILTQCESDLTSAKESCSSGIDSAKSDCEDTLDAIDITDEAWDEVEGAID WFEDNGLFRQNKLIEASEAMVTALDYVTEFFTFEVESDFGLSGTVNYSKNASTVLSEIQSDILSRISGVLSFITTISNVL GLTLIILFIKSLIYIKKYRTKDHFNNIFITKGFVRFDDDCKKRGEEFVLPLHSSEEVYTYVMTTTKILSPAEMKTLKTDM RLVFYHVLISTFIIGFDYILYYALDLVTQYADVALTVEGISTIDVEIEGDGIFTVILRAMVDNLNLNSTFSVDLNFTCCL PDPSYPDSSNIPVLILLYIIAALFVTMQGYGMRLRRKIASSFYPEQEVCRIHYLHEKIIHKRLTFKAWLKDHIFSRRKEN EVREKNNFRAYLAYKSPFFSKYIEIILPSRKSCLSCDKVGRRGMIFKKCDNKSCSALFCEDCFKFTKGHCLVCDTKNEIR NIQNA |
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