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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4955.1_67103
Locus scaffold4955.1 : 45566 ... 51105 : -
To GenomeBrowser scaffold4955.1:45566..51105
Genes list of scaffold scaffold4955.1
Synonym pfu_aug2.0_2058.1_28642

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4955.1_67103.t1 1 1 SH3_9 67 116 1.7e-08 33.9 1.2e-11 2.9e-08 33.1
pfu_aug1.0_4955.1_67103.t1 1 1 SH3_1 72 112 6.4e-06 25.4 5.3e-09 1.3e-05 24.4
pfu_aug1.0_4955.1_67103.t1 1 1 DC_STAMP 505 696 1.4013e-45 156.2 0.0 1.4013e-45 155.3

Transcript
Transcript IDpfu_aug1.0_4955.1_67103.t1
Definition-
>pfu_aug1.0_4955.1_67103.t1
atgctcccacggaagacgatgctacgatggcgatgccacgaagttacgatgacgatgctacgatattacgatggcgatgc
cacaatgttacgattgcgatgccacgattttacgatagcaatgacaagatgttacgatggcgatgaagagattttttatt
tcatttacacgtatacatctaaaatggcgacatttaaagtcctagcagcacacgaagaaagtaagaagggtgaattgagt
atcgaagtaggagacgatgttgatcgagttaaagacatcgggaatggatgggttctcggtagaaacgttcgcacaggaaa
aacaggacttttccctgagaattgtatcgacagagctactagtgtaacgagatctattgtacgtcgtgtcaccaagagga
agccaagtttaccaacaaaaggtcctaaggtacgactgctgttggacaatcgtaaggaatatgtgtctaataatgaagac
gtccctttgaaaaattcttcagaagagagttcagacaatgtggcagtacagcagaaccattctggtgatgtcgccgcctc
aaagccaacaaacgttgaacgttcttttgacttcatgaaatatgaatacgacaagatacaagaacgggtccgtaaagcag
ctcaagtcactagagggaaagtttccgacttaaattataaactattaaaaagcgaagaaaaccagtttcgacttatgaag
acgatatggcgaatctctcttgctatactggccaccggaatcttgtacatgctactatatttcagttttggattcaatgc
cttagacgccggatacctaatgataggaatgtttatatttttcatggtcggtttggtctttttcaaacttattcgatgcg
tcatattactgatggtaccgaacttattcactggtcgagggagggccttatttctgtcgatcataacgggtatactgtta
gctggtcccgctataaacatcgccaataacacagacgagcttagtacaagtctgggatgcacagcggatctgatctataa
ccaaacacaagccctgcgaaagcaactagaagaacctttgtatcagcttgccaggaagcttaggaattatatgtacgagc
ttcgccttcttattgacggaatcactacagctctacagccgttgaccaacgccctgagtaccttctctaatgcagttcaa
actgccattgatgaagtatcgaaactttctgacaacaagctaaaggctgcatcagaagctatgctcacagctcttggcta
tgttactgcgttctttaagtttgaagtgaaaacggactttggcatctctggaacggtgaactattcaaagaacgcgtcaa
ctgttctcaatgaagtaaaaagggatattctgtcgaggatcagttggattctgaacatattctccactattagtaacgtt
ttagggcttactttgataattctattcgttaaatctttattatatattaagaaatatcgcacaaaggaccgcttcgacaa
catctacatcacccaggcttttgttgactttgatgaggattgtaaaaagagaggagaggagtttgtgttacctcttgtaa
caaaagaggaaattgtcacgtatgtcatcaccacaaccaaaaagttatcaccagctgagtcaagaacactcaacactgac
attagaatcgtcctgatccatgtgttgatatcaacactcacaatcgggtttgactatgtgttatattatgccttatacct
cgtgacaaagtactcaaatgttgcattgaccgttgagggcattagtaccattgacgttaacgttggtggaaacggtattt
tcgctgtcattttaagagcaatggtggacaatttgaacctcaacagcacgttcagtgttgacctgaactttacgtgctgc
ttgccgaatccttcataccctgatatctccaacatccctgtcctgttactgctttatgctatagctattttcttcgtagt
catacagggatatggaatgaggctgaggaggaagatagcctcctctttttatcctgaacaggaagtttgtaggattcact
acctccatgagaaaataattcaccaaaggctgacgttcaaaacgtggttaaaagaccttgtcttcagcagacgcaaagag
aacgaagtcagggagaggataagtttacgggcagtactttcctacagatcaccattctttgcaaagtatatagaggctat
actgcccgacaagcggtcctgtctaagctgtgataaggtggctcggagggggatgatctttaagaaatgtgacaataaat
cgtgtaatgcactgtattgtgaggattgtttcaaattcatcaaaggccactgtctggtttgtgatacaaagaaagaaatt
agtagcgcccagaaaaagaatgaaaggaacattcgaagtgtatga

Protein
Protein IDpfu_aug1.0_4955.1_67103.t1
Definition-
>pfu_aug1.0_4955.1_67103.t1
MLPRKTMLRWRCHEVTMTMLRYYDGDATMLRLRCHDFTIAMTRCYDGDEEIFYFIYTYTSKMATFKVLAAHEESKKGELS
IEVGDDVDRVKDIGNGWVLGRNVRTGKTGLFPENCIDRATSVTRSIVRRVTKRKPSLPTKGPKVRLLLDNRKEYVSNNED
VPLKNSSEESSDNVAVQQNHSGDVAASKPTNVERSFDFMKYEYDKIQERVRKAAQVTRGKVSDLNYKLLKSEENQFRLMK
TIWRISLAILATGILYMLLYFSFGFNALDAGYLMIGMFIFFMVGLVFFKLIRCVILLMVPNLFTGRGRALFLSIITGILL
AGPAINIANNTDELSTSLGCTADLIYNQTQALRKQLEEPLYQLARKLRNYMYELRLLIDGITTALQPLTNALSTFSNAVQ
TAIDEVSKLSDNKLKAASEAMLTALGYVTAFFKFEVKTDFGISGTVNYSKNASTVLNEVKRDILSRISWILNIFSTISNV
LGLTLIILFVKSLLYIKKYRTKDRFDNIYITQAFVDFDEDCKKRGEEFVLPLVTKEEIVTYVITTTKKLSPAESRTLNTD
IRIVLIHVLISTLTIGFDYVLYYALYLVTKYSNVALTVEGISTIDVNVGGNGIFAVILRAMVDNLNLNSTFSVDLNFTCC
LPNPSYPDISNIPVLLLLYAIAIFFVVIQGYGMRLRRKIASSFYPEQEVCRIHYLHEKIIHQRLTFKTWLKDLVFSRRKE
NEVRERISLRAVLSYRSPFFAKYIEAILPDKRSCLSCDKVARRGMIFKKCDNKSCNALYCEDCFKFIKGHCLVCDTKKEI
SSAQKKNERNIRSV

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