Gene
| Gene Model ID | pfu_aug1.0_4955.1_67107 |
|---|---|
| Locus | scaffold4955.1 : 87626 ... 94081 : + |
| To GenomeBrowser | scaffold4955.1:87626..94081 |
| Genes list of scaffold | scaffold4955.1 |
| Synonym | pfu_aug2.0_134.1_13665 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4955.1_67107.t1 | 1 | 1 | 7tm_1 | 43 | 338 | 1.5e-23 | 83.2 | 3.6e-27 | 1.8e-23 | 83.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4955.1_67107.t1 | gi|224085776|ref|XP_002189484.1| | PREDICTED: vasopressin V1b receptor [Taeniopygia guttata] | 3.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4955.1_67107.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4955.1_67107.t1 atggcagagaatgtgacaatccacggagatgtagagtttgctttacagcaatggaacagagacttagtgcaacgttaccc atggaaccctgtagtctttttaacattattgactatcggtattgtcggtaatggaacagtgatgtttatttacagacttc gtatgaagaagaaaatggaagaacgattcttcattcctattctggcctgtatggattttgttgcctgtgttttcttgtgt agttttgcgatctaccagagctttaagcctgtgacaatatctagtgcacctctgtgtaaatccatgatgtaccttcagca cgcctcgtcagcctgctcgctcttcatgcttctagctatcgccttccaaagatacaaaatggtgtgccgtccttttcagc gccaaatgagtcagtctatgaaatacgtcgctataggacttgctgttacttgcgggtatcttctctttattccacatgtg tttctctcaaacatagtaactgttgactccgatattccaggactgcacggacagagatgtacaacggcagcatacaccaa gacagagcggacactacagatcagctacaggcttgttatcttctgtgtgttcttactgaccatcatcatcatgtcgttgt tgtattcactgatagctaagaccattatacacagaatgaggatcatgaagagccccatgtctcctgtgtcaccgagggca acaacagaacgttatactagggcaaaatcaatcacaggaccggcagcactcaaaaagggcgacaaagaagtgttcacgtt tgattctttaaggcggaaaaggagacattttgttacaaatagatattcctacatgtttatgacaattacggccatggcaa tcatctcgtatatagtccccatcatcctagctatcagtaccggcagctcgggaactgacgtggagaaatcattaacttat tttatctttaaacgactttttgttctatcacacattgtaaatccttttatttacggagcgtttgatcatacgttcaggga acacatgggatctttatgtgttgctcccgtggggcggagagaaagtagatctacggtcaatagcatccacagctcagact ga |
|
Protein
| Protein ID | pfu_aug1.0_4955.1_67107.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4955.1_67107.t1 MAENVTIHGDVEFALQQWNRDLVQRYPWNPVVFLTLLTIGIVGNGTVMFIYRLRMKKKMEERFFIPILACMDFVACVFLC SFAIYQSFKPVTISSAPLCKSMMYLQHASSACSLFMLLAIAFQRYKMVCRPFQRQMSQSMKYVAIGLAVTCGYLLFIPHV FLSNIVTVDSDIPGLHGQRCTTAAYTKTERTLQISYRLVIFCVFLLTIIIMSLLYSLIAKTIIHRMRIMKSPMSPVSPRA TTERYTRAKSITGPAALKKGDKEVFTFDSLRRKRRHFVTNRYSYMFMTITAMAIISYIVPIILAISTGSSGTDVEKSLTY FIFKRLFVLSHIVNPFIYGAFDHTFREHMGSLCVAPVGRRESRSTVNSIHSSD |
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