Gene
| Gene Model ID | pfu_aug1.0_4960.1_30828 |
|---|---|
| Locus | scaffold4960.1 : 30885 ... 59135 : - |
| To GenomeBrowser | scaffold4960.1:30885..59135 |
| Genes list of scaffold | scaffold4960.1 |
| Synonym | pfu_aug2.0_175.1_17062 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4960.1_30828.t1 | 1 | 1 | Arf | 89 | 159 | 1.8e-21 | 76.1 | 4.3e-25 | 3.2e-21 | 75.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4960.1_30828.t1 | gi|297289244|ref|XP_001087880.2| | PREDICTED: ADP-ribosylation factor 5-like [Macaca mulatta] | 5.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_4960.1_30828.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4960.1_30828.t1 atgacaaatatggataatgaccatatcactaaatacagcacaaaatcgataattcagaaaatcagaaaccgaaggcatac aaaatcaagattatacaggaaccaaagcaaagaacaaaaacctccaacatatgaaaagaagcgaactcccgatatgggag tgagaccaggtgcccaggaagatttctttgactttaagctccgaaggatagatactgctatggtgatctgcgaattttgg attactgatggacaacacatcgtatatgtatctgggttgatatttgtgattgacagcaatgacagagaacgagcagaaga agctaaggatgaactaagtaaaatgctccaggaggacgagttgagagatgcaaaattattagtgtttgccaataaacagg atctgccaaatgccatgccagcagctgaaatcacagaaaaattgggacttcaatgcctaagaaacagaacagaagccaag gaaacagatctggtgtacaatagaattgtagatgagatcctgaaacatttccacagaataagattttcacttttgggccc agctgacaaggagaatgacccaaatcagattgaaagtaaacagaagcttgaactgagatctccagaaaataagatgtgta aaaataactttgcgaagctgaagagtccttctcatctaataagaagtaatcagtcgaccagacatgtggatgaaggactt gtgaagcctggatttgacacagtgaagtcaatgacacctaataacaataataaagagaaatcaccaaaacaatttcgtcg tagaataagtaaagaattaaaagctttaggaatcagtccattttgcaaagaaacaagatcaccagaacatcaaaatataa ggaaaaggttggctaacatcagaaatgtttctcggtgtgcttcagattccaaaaatgcagagatatttgatcatggaaaa aataacagcaagattttatctgaagtaactatacctgatggtcagagtgtattgataaaggatttaagatcatgtaaaaa tggtggtctgtcaggaagagaaccagatggtactaaaggggtacaagttacaccaaaggaagatgaacctcaagtacatg cagatagtgggaagaaagagagaagaggttctagatctggcaaaaggaaatcctgtttggaagtaaggaagggaaagatt tctaagattagttcaagcgacactatgaaggcagaggaaaatgttgcagaaaatgatggtgacgatggtagtaagactga gaaactgcaggacaagacttattattcaaacatcagtgactttgcaacgtcttatgattcaaggtcggatagagataccc ctgaattgctggaagacgcctcattacgttcaagtcaaacccaacctcagctagaatataaagtgatgtctgatgaagaa caatacaaacaacattgtaagaaatatctaggaggtgaaatctcaacaaacattgtcacattcaagcaaacttctgagat gtcaacaagggaaaatctgatatgtcccactcttcctccttctcacaatggacttgagcagactgatccagtattctctc tggaaaccaacacagatacctgtcaggagatgtctgacagaatacctggaactccagtctctgagagaaataactgtaat aattatacatcaggcccacatgttgatctcaggaattttgattcaccctcgccaatagttagagtagataaatacctgga gagagtaggtgtcagctcctcaggaagtgttactccaacaaggaacggtaattactcctttccgttagtgagtcagtcct caccatttaccttcgtccaccaggcaggaagtataggattggatggtgaacctacagaaataggggacagtgatacagag gacgtattgacggaaataaacaagtctatagctgagtttgatgcagaggctgtaatagacctcagtgtcgacaacaacag tttactatcggattaccaggatatttggccaacactctcccttatgtcatctgcagtcagctctagcaagcagtcctgtg ggaatggtgatgaatgtggtagaacacggaaggaatcagagctgtctgaatccaggagtgatctgtccggagccagcgag atgtcagatatcatacctctgtctcaggacccaaaggtgtttcatgaacttgaactaaggtcatag |
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Protein
| Protein ID | pfu_aug1.0_4960.1_30828.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4960.1_30828.t1 MTNMDNDHITKYSTKSIIQKIRNRRHTKSRLYRNQSKEQKPPTYEKKRTPDMGVRPGAQEDFFDFKLRRIDTAMVICEFW ITDGQHIVYVSGLIFVIDSNDRERAEEAKDELSKMLQEDELRDAKLLVFANKQDLPNAMPAAEITEKLGLQCLRNRTEAK ETDLVYNRIVDEILKHFHRIRFSLLGPADKENDPNQIESKQKLELRSPENKMCKNNFAKLKSPSHLIRSNQSTRHVDEGL VKPGFDTVKSMTPNNNNKEKSPKQFRRRISKELKALGISPFCKETRSPEHQNIRKRLANIRNVSRCASDSKNAEIFDHGK NNSKILSEVTIPDGQSVLIKDLRSCKNGGLSGREPDGTKGVQVTPKEDEPQVHADSGKKERRGSRSGKRKSCLEVRKGKI SKISSSDTMKAEENVAENDGDDGSKTEKLQDKTYYSNISDFATSYDSRSDRDTPELLEDASLRSSQTQPQLEYKVMSDEE QYKQHCKKYLGGEISTNIVTFKQTSEMSTRENLICPTLPPSHNGLEQTDPVFSLETNTDTCQEMSDRIPGTPVSERNNCN NYTSGPHVDLRNFDSPSPIVRVDKYLERVGVSSSGSVTPTRNGNYSFPLVSQSSPFTFVHQAGSIGLDGEPTEIGDSDTE DVLTEINKSIAEFDAEAVIDLSVDNNSLLSDYQDIWPTLSLMSSAVSSSKQSCGNGDECGRTRKESELSESRSDLSGASE MSDIIPLSQDPKVFHELELRS |
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