Gene
| Gene Model ID | pfu_aug1.0_4962.1_67113 |
|---|---|
| Locus | scaffold4962.1 : 50107 ... 52355 : - |
| To GenomeBrowser | scaffold4962.1:50107..52355 |
| Genes list of scaffold | scaffold4962.1 |
| Synonym | pfu_aug2.0_39.1_30037 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | PfCHS1 |
| Description | C-terminal partial region of chitin synthase(PfCHS1), best hit to BLAST BAF73720.1N-terminal part is continued to the next gene (pfu_aug1.0_4962.1_67114) |
| mRNA evidence |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4962.1_67113.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4962.1_67113.t1 atgataacggggtcctaccactctgtcctgaacctgtctatctggcagtcatacctactgagcttactgcctgtcgttag ttaccttgtgatctgtatgactatgaagagtaaccaccaaatcacggcagccgctgttataacggcattgtattcggtta tcatgatgatagccactgttggaaccattgtaagtatcgtcactgagaactttggtagcccaaacgtggtgtttttgagt ggtttggttatcatatttgtgattgctggaatactacatccccaggagttcttctgccttgtgtacggtgtcttgtactt tatgacagtaccgtcaacgttcatcctactgacgatatactatttggccaatttgaacaacgtttcatggggtactcgtg agacaccaaagaagctgaccaaggaagaagaggaggaaatgaaaaagatggcggaggagaagaagaaaaagaaagaaagc aaaagtcttctgaatagacttggcatcatcaacatcatgaacgacttcagggaggtcatcagaagcttaattggaaactc gaatgcaacagagaagaaagaaacaacttgtagtgccgtgcagactgagaacgtgatgccgcctctggaaagagaactgt ccaagaagagcagacacagtgaaataaaacgacccaaggaggaagaagtcgatgtggtccccgtgggatgggagcccgat cctctgaatccatactggctcaaactagattaccttggaaacggacctgtgtcttacattgatcaagacgaaacggaatt ctggagatttatgatcaagaaatacttgcatcctttggacgaagaccaacagcataagcagaaaatcaaagaggatctga tttcattgaagaacaatgttgtatttatttattgcatgatcaactttttatggacaattattacactacaactccaaagc atggaagacgaactaaagaacttttatattatcaacaaatatgagccgttgtctctcatttttctttccatctttgctat agctatcagtcttcagttccttagcatgtttatgcatcgctggggaacatttttgcatctcatgtccagtacacgcattg actggctgaaaaagatgcacacagaggaggattttgttaggttcgtcgttagtgaagcccaacgtctgcaacgacttgaa ccggaaccagattatgacgacttaccgccggattatgaggacgacgaaacaacggcgacaactccatctgagcagtatga cgagttaccgtccttacccgcaacgccgcgggaaaccttcagtcgctctgttcgcagacgatatggaacaatgcgcgatc atgaaaatacagatatacctttattacaacaaatatttgaagatagacttgaaaatattcacagaaagtggaagagaggt acactagcatttagacccaatcatctttttactcgaacagacagtcatagagtttcagaaaaagaacaagaaatgagaca aaaaatgtttaaaagaagcttcagacgaatccacagtagggaggataaatcattagaacaaaacggacagagtattatta tcgatatgcataagttatag |
|
Protein
| Protein ID | pfu_aug1.0_4962.1_67113.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4962.1_67113.t1 MITGSYHSVLNLSIWQSYLLSLLPVVSYLVICMTMKSNHQITAAAVITALYSVIMMIATVGTIVSIVTENFGSPNVVFLS GLVIIFVIAGILHPQEFFCLVYGVLYFMTVPSTFILLTIYYLANLNNVSWGTRETPKKLTKEEEEEMKKMAEEKKKKKES KSLLNRLGIINIMNDFREVIRSLIGNSNATEKKETTCSAVQTENVMPPLERELSKKSRHSEIKRPKEEEVDVVPVGWEPD PLNPYWLKLDYLGNGPVSYIDQDETEFWRFMIKKYLHPLDEDQQHKQKIKEDLISLKNNVVFIYCMINFLWTIITLQLQS MEDELKNFYIINKYEPLSLIFLSIFAIAISLQFLSMFMHRWGTFLHLMSSTRIDWLKKMHTEEDFVRFVVSEAQRLQRLE PEPDYDDLPPDYEDDETTATTPSEQYDELPSLPATPRETFSRSVRRRYGTMRDHENTDIPLLQQIFEDRLENIHRKWKRG TLAFRPNHLFTRTDSHRVSEKEQEMRQKMFKRSFRRIHSREDKSLEQNGQSIIIDMHKL |
|