Gene
| Gene Model ID | pfu_aug1.0_49721.1_20049 |
|---|---|
| Locus | scaffold49721.1 : 218 ... 3962 : - |
| To GenomeBrowser | scaffold49721.1:218..3962 |
| Genes list of scaffold | scaffold49721.1 |
| Synonym | pfu_aug2.0_1394.1_15011 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_49721.1_20049.t1 | 2 | 1 | Ank_5 | 5 | 43 | 8.9e-20 | 70.2 | 8.5e-12 | 2.5e-08 | 33.8 |
| pfu_aug1.0_49721.1_20049.t1 | 2 | 1 | Ank | 6 | 36 | 4.1e-21 | 73.6 | 1.5e-12 | 4.4e-09 | 35.6 |
| pfu_aug1.0_49721.1_20049.t1 | 1 | 1 | Ank_2 | 6 | 66 | 1.5e-18 | 66.8 | 7.1e-22 | 2.1e-18 | 66.4 |
| pfu_aug1.0_49721.1_20049.t1 | 2 | 1 | Ank_4 | 6 | 59 | 3.7e-17 | 62.3 | 5.3e-19 | 1.6e-15 | 57.1 |
| pfu_aug1.0_49721.1_20049.t1 | 2 | 1 | Ank_3 | 6 | 33 | 9.2e-15 | 53.2 | 1.3e-09 | 3.9e-06 | 26.5 |
| pfu_aug1.0_49721.1_20049.t1 | 2 | 2 | Ank_5 | 28 | 78 | 8.9e-20 | 70.2 | 6.4e-14 | 1.9e-10 | 40.6 |
| pfu_aug1.0_49721.1_20049.t1 | 2 | 2 | Ank | 40 | 67 | 4.1e-21 | 73.6 | 7.5e-13 | 2.2e-09 | 36.6 |
| pfu_aug1.0_49721.1_20049.t1 | 2 | 2 | Ank_3 | 40 | 64 | 9.2e-15 | 53.2 | 5.1e-09 | 1.5e-05 | 24.7 |
| pfu_aug1.0_49721.1_20049.t1 | 2 | 2 | Ank_4 | 46 | 78 | 3.7e-17 | 62.3 | 0.00045 | 1.3 | 9.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_49721.1_20049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_49721.1_20049.t1 atggacattatttcagggctgacaccgcttcatcaggcagtacttgacgggaatatcaccgcagtgcgcctgctcataca gcacggagcggaagtgaaccgacaggatgaagattcatggactcctcttcatgccgcatgcgcagaaggacacgccgata ttgcgaagttgcttctgaaacatggagcaagtaaagaaatcctaacagaggacggagagcgccccctggatttagttgaa cccacggactttcccacaatccgggtaatgctgggtaaagtcccgctagatggcgctgatacggactcagcagacgatct cgacgaccatgacacgaacggacaggaataa |
|
Protein
| Protein ID | pfu_aug1.0_49721.1_20049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_49721.1_20049.t1 MDIISGLTPLHQAVLDGNITAVRLLIQHGAEVNRQDEDSWTPLHAACAEGHADIAKLLLKHGASKEILTEDGERPLDLVE PTDFPTIRVMLGKVPLDGADTDSADDLDDHDTNGQE |
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