Gene
| Gene Model ID | pfu_aug1.0_4985.1_52417 |
|---|---|
| Locus | scaffold4985.1 : 13536 ... 23687 : + |
| To GenomeBrowser | scaffold4985.1:13536..23687 |
| Genes list of scaffold | scaffold4985.1 |
| Synonym | NA |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | Pifuc-Dm-like B |
| Description | Reciprocal BLASTP best hit to NCBI Accession ADB22403 (Saccoglossus kowalevskii) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4985.1_52417.t1 | 1 | 1 | DM | 2 | 35 | 1.3e-15 | 56.6 | 3.3e-19 | 2.5e-15 | 55.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4985.1_52417.t1 | gi|284005057|ref|NP_001164688.1| | double sex and mab-3 related transcription factor [Saccoglossus kowalevskii] | 2.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4985.1_52417.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4985.1_52417.t1 atggtatcatggcttaaaggacataagagacattgtaaattcaaagactgcacttgtccaaaatgcaatctgatcgcaga gagacagcgcgtgatggcggcacaagttgccttgaaacgccagcaagccgctgaagacgccattgcgttaggactaagat gtgcgtccgagggtaacatccctatcatgacacagggaccgttgtgggggccagggaccgtgtcaccaccagagaaaacc caagacgaccagactgatgttgatatagatgtagattccagtgatgatccagttcgtaaacattcctgtagagctgcaaa cacttcaagtgtcaataaaaatgtttattttgatacaattataaagtccagtgtgaagcattatcgatatcttgagaaaa atgttcagacaccaatcactcttgaatgccttaaattgaatgcaaattcgtga |
|
Protein
| Protein ID | pfu_aug1.0_4985.1_52417.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4985.1_52417.t1 MVSWLKGHKRHCKFKDCTCPKCNLIAERQRVMAAQVALKRQQAAEDAIALGLRCASEGNIPIMTQGPLWGPGTVSPPEKT QDDQTDVDIDVDSSDDPVRKHSCRAANTSSVNKNVYFDTIIKSSVKHYRYLEKNVQTPITLECLKLNANS |
|