Gene
| Gene Model ID | pfu_aug1.0_4988.1_67120 |
|---|---|
| Locus | scaffold4988.1 : 10579 ... 34185 : - |
| To GenomeBrowser | scaffold4988.1:10579..34185 |
| Genes list of scaffold | scaffold4988.1 |
| Synonym | pfu_aug2.0_108.1_26867 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4988.1_67120.t1 | 2 | 1 | CDC27 | 2 | 73 | 1.8e-19 | 70.2 | 1.6e-22 | 2.4e-18 | 66.5 |
| pfu_aug1.0_4988.1_67120.t1 | 2 | 2 | CDC27 | 79 | 211 | 1.8e-19 | 70.2 | 0.00036 | 5.4 | 6.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_4988.1_67120.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4988.1_67120.t1 atgaggatgctatatgcctttattcaagaccagaggaataagaaggacaatgatggtttatatgtgacctactttgtagc tggcgtgacaaaaccagacagtggaattcagtgccataaatgcagtattgtatcagaggaaaatttgaatccagccaaaa gcagctttgcttcagttactagctgtcacatctacagtgtacagaagtcaaaggtcaaggtagatgggagtaaagattcc aagattagcaatgctgggacaaataaaccagccccaaagaagggaggcatagcaagcatgttcagtaaacaggcagaaaa aaaatctccggaaaaagtggaaaagtcagagctgaaggaagacaagaagtctcatgacacaaaaacagcaaagaaaggag ttatgaacttctttgccaatcacacaggaaagaaatcagaaccaaaggttgaggaaaagaaggcggagcctgaacctaaa aaggcagagacagtttctccacctaagaatgaaagtaaagccaaaggaactaaaggaaagaagacaagtagaaaagctga aacagacgatgatgatagaaagaagaaaagacgaagaattgtacaagagtcatctgatagtagcagtgaagaagggtcta atgctaaagttcaaacagctcaagttcttggtataatcctgaaaccatga |
|
Protein
| Protein ID | pfu_aug1.0_4988.1_67120.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4988.1_67120.t1 MRMLYAFIQDQRNKKDNDGLYVTYFVAGVTKPDSGIQCHKCSIVSEENLNPAKSSFASVTSCHIYSVQKSKVKVDGSKDS KISNAGTNKPAPKKGGIASMFSKQAEKKSPEKVEKSELKEDKKSHDTKTAKKGVMNFFANHTGKKSEPKVEEKKAEPEPK KAETVSPPKNESKAKGTKGKKTSRKAETDDDDRKKKRRRIVQESSDSSSEEGSNAKVQTAQVLGIILKP |
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