Gene
| Gene Model ID | pfu_aug1.0_4993.1_16565 |
|---|---|
| Locus | scaffold4993.1 : 9636 ... 16349 : + |
| To GenomeBrowser | scaffold4993.1:9636..16349 |
| Genes list of scaffold | scaffold4993.1 |
| Synonym | pfu_aug2.0_358.1_27285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4993.1_16565.t1 | 2 | 1 | Peptidase_A17 | 130 | 151 | 1.8e-15 | 57.1 | 0.00012 | 0.9 | 9.3 |
| pfu_aug1.0_4993.1_16565.t1 | 2 | 2 | Peptidase_A17 | 150 | 217 | 1.8e-15 | 57.1 | 4.1e-16 | 3.0e-12 | 46.6 |
| pfu_aug1.0_4993.1_16565.t1 | 1 | 1 | rve | 520 | 652 | 1.7e-11 | 44.2 | 4.9e-15 | 3.6e-11 | 43.2 |
Transcript
| Transcript ID | pfu_aug1.0_4993.1_16565.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4993.1_16565.t1 atgttctctccggctgtagcgacgtacggactacttaaggcttcatcacttgctgtcgaaagtcatggtcaacacgttac gcaattcatatcagaaaatttttatgtagacgacggcctcacttcctgcgctactagcgaagaagccataaccctcctac gccaaacacaagatgcacttatgaagtatggcaaactaagattgcacaagtttgcatctaattctaaagctgttttggat gcgtttgaccaaaaggacctcgctaaagacttgctagatctggacttggacaaggatcaactcactcaaaggagtcttgg tctactgtggaacttgtcatttgatgcgttcgtattcagcattacacccgaagttaaaccggtctctcgtagaggcgttt tatccaccattaactcactgtataatccattaggatttctttcaccggcaattgccgctgtctgttatttgagagcaatt tacaacgatggtcatactgagattggatttgtgctcggaaaggcaaaggttgcgccggtatcaggtcacacgataccaag attagagttgtgcgctgcggttttggcggtagagatatatcagttagttttggatcatctcaaaatggaatttgactctg tccgtttcttcactgattcacgagtggttttaggatacatttgtaacgataaaagacgtttctttgtttatgtatcgaac cgcgtctctcgcatccggagttgtactacacctgatcaatggaattacgttccttcaatcaccaacccagctgaccaagg taccagaggtgtgaacgctatagacattcagaacagctcttggttaaaaggtcccgcgtgtgattttggatcagataagg atacttcttacccgttggccaatcctttattggatgaggaagtccgtatcgattgtttgaaaactagcttggaacccact ccagcagtatgtactccttttggaagcgatctgtttcagcgttactcaaaatggagaaaacttgtgaacgtaatctccgt tgttcgatttttcatcgctaagtgcagaaatgaggaaactgactcatctttgaaacattccgtaaaatcattcatagata cggagcgctggatcttgaagaaagtacagcatgaggaatattttgaggaaatgaattgcctccactcttctcagccgatt catagaagcagcaaaattatatctctggatccgttcctcgatcaaaacggtatcttgcgcgttggtggaaggttgggaaa aatggatactgacacttgcttcataaaccctatcatcattccaggaaatcacaatgttgcacgacttctcattctcatgt gtcatgaagaagttgcccatcaaggccgtcactttacagaaggcaggataagatcccacggatattggatcactgggtgc aagagattagttgcgtccattattcacaaatgcgtctcgtgtaagaaattgcgtggaaaacttgaagtacaaaaaatggc cgatctacctatagaccgcatcacacccggacaaccaccttttacctatattggagtcgatatgttcggtccctgggaaa tcatgactcgccgtacacgaggaggagctgcaaatagtaagcgttggacagccatgtttacatgtctagtgacacgcgca gtgcacatagaggtaaccgaagaaatgtcggcatcttcatttattaacgcactccgtagattggttgccattcgaggcag ggtacgggaaattcgatcagatcgaggtagcaatttcataggagccgcagatcttcttggagccgactctgtaaacgtgg aatctggttgcgttagtgaattcctgcgaaatagtggaatcgtatggcgcttcaaccctcctcactcttctcacatggga ggagtgtgggagaggatgataggagtgacaagacgcatactcgactcaatgcttcttcgtaataccgtaggacgacttac ccatgaagtcttggtaacatttttcgctgaagcaagtgcaatcataaatgctcgtccgctaattcctgtctcttccgatc cgagtatgccttatatcctgacaccttcgctacttcttacccagaaatctgattctgttgacgacactattccgctagat gaagatcctaaaaatcttcttcggagtcaatggaaaagattgcagcatctcgcaaacattttctggaaactttggaggac tgaatacctacctcttttacagcctaggaaaatgtggcgtcaaaaacagagaaatattttcgtgcacgatgtagttctga ttaaagacaaagacgcaaaacgaaacgagtggcccatgggtatcgttgtgaaaacatttcctagcgatgatgatctcgtg acaaaggtgcaagtgcgtgttattcgcgatgaaaagccatatacacgcggccaattacagaccttgtgttgttag |
|
Protein
| Protein ID | pfu_aug1.0_4993.1_16565.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4993.1_16565.t1 MFSPAVATYGLLKASSLAVESHGQHVTQFISENFYVDDGLTSCATSEEAITLLRQTQDALMKYGKLRLHKFASNSKAVLD AFDQKDLAKDLLDLDLDKDQLTQRSLGLLWNLSFDAFVFSITPEVKPVSRRGVLSTINSLYNPLGFLSPAIAAVCYLRAI YNDGHTEIGFVLGKAKVAPVSGHTIPRLELCAAVLAVEIYQLVLDHLKMEFDSVRFFTDSRVVLGYICNDKRRFFVYVSN RVSRIRSCTTPDQWNYVPSITNPADQGTRGVNAIDIQNSSWLKGPACDFGSDKDTSYPLANPLLDEEVRIDCLKTSLEPT PAVCTPFGSDLFQRYSKWRKLVNVISVVRFFIAKCRNEETDSSLKHSVKSFIDTERWILKKVQHEEYFEEMNCLHSSQPI HRSSKIISLDPFLDQNGILRVGGRLGKMDTDTCFINPIIIPGNHNVARLLILMCHEEVAHQGRHFTEGRIRSHGYWITGC KRLVASIIHKCVSCKKLRGKLEVQKMADLPIDRITPGQPPFTYIGVDMFGPWEIMTRRTRGGAANSKRWTAMFTCLVTRA VHIEVTEEMSASSFINALRRLVAIRGRVREIRSDRGSNFIGAADLLGADSVNVESGCVSEFLRNSGIVWRFNPPHSSHMG GVWERMIGVTRRILDSMLLRNTVGRLTHEVLVTFFAEASAIINARPLIPVSSDPSMPYILTPSLLLTQKSDSVDDTIPLD EDPKNLLRSQWKRLQHLANIFWKLWRTEYLPLLQPRKMWRQKQRNIFVHDVVLIKDKDAKRNEWPMGIVVKTFPSDDDLV TKVQVRVIRDEKPYTRGQLQTLCC |
|