Gene
| Gene Model ID | pfu_aug1.0_4996.1_01874 |
|---|---|
| Locus | scaffold4996.1 : 1 ... 27531 : + |
| To GenomeBrowser | scaffold4996.1:1..27531 |
| Genes list of scaffold | scaffold4996.1 |
| Synonym | pfu_aug2.0_39.1_30044 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4996.1_01874.t1 | 3 | 1 | RasGAP_C | 116 | 141 | 6.4e-28 | 97.2 | 0.39 | 1400.0 | -1.2 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 1 | IQ | 211 | 228 | 8.6e-09 | 34.2 | 5.7e-09 | 2.1e-05 | 23.7 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 2 | IQ | 240 | 245 | 8.6e-09 | 34.2 | 0.75 | 2800.0 | -1.5 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 3 | IQ | 249 | 266 | 8.6e-09 | 34.2 | 6.6e-05 | 0.24 | 11.1 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 1 | RasGAP | 305 | 310 | 4.2039e-45 | 153.9 | 0.71 | 2600.0 | -2.2 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 2 | RasGAP | 428 | 640 | 4.2039e-45 | 153.9 | 0.0 | 4.2039e-45 | 153.9 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 2 | RasGAP_C | 660 | 695 | 6.4e-28 | 97.2 | 0.17 | 620.0 | 0.0 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 3 | RasGAP_C | 737 | 828 | 6.4e-28 | 97.2 | 1.7e-31 | 6.4e-28 | 97.2 |
| pfu_aug1.0_4996.1_01874.t1 | 3 | 3 | RasGAP | 770 | 821 | 4.2039e-45 | 153.9 | 0.59 | 2200.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4996.1_01874.t1 | gi|351700318|gb|EHB03237.1| | Ras GTPase-activating-like protein IQGAP1 [Heterocephalus glaber] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4996.1_01874.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4996.1_01874.t1 gaattattgccatatcaaatataaaccagactatagacaaaggagatccctcacagacattagaagcattgaatatgcca acagcaaaactcaaagatgttgatgaaaaacaagactacagatatcaggttttacttgtacgagaaaaaaggaaaaaggc cgagagctcaggtgatgaagaagctgaattgtgggtagaggaaattcagactgccattgaaaatggtaacaaagatgcag aggttggcctcaaattatcccaggcagtagagttagtaaataagtcagctacagataatgaccttgaccagttgtccaca gccttgacctcccctgaccttacattacacagtgttataccagactgcatgcagacatatcaggaaaaactacaggaggc tatagatgaaaagtccaaagaaggtgaaaagggaagtgggtggatgatgaacagattaaaggatgggtcgaagttttact ataacactacaacaaaggaatataaatggtccaagccggatggtgtggtcaaagacaatggtatacttacaaaggaggaa atccagaaagtagtaagtgacgtgaccgcagcccacgatcgagagcttctgttccagtctaacgagggtcttattgtgaa gatccaatcccagtacaggggttaccaagccaggaaagcttatagagggaggatggacttcataaagagacaattacccg ccatcatcaaaatacaggagccagatgttgtaaagatccaggcatttgtaaggtcaaacaaggccaaacatgactacagg gcattaatgcatgaagataatcctcctgtgtctgttgtacaaagatttgtccaccttctagacgccagcgatgtggatta ttctgaagaaatagagcttcagaaattacggcagcgagttgttactgaaatcaggtcaacacaacagctggagaatgacc tggatcagatggacattaagataggtttgctcatcaagaacagggtcacattacaggatgttgtgacacatgacaagaag ttatctaagcatagagaggatgctaagacggtacctaaaggcctgaaggctctcagtaaggaatgccacgataggctgga ggcgtatcaacatctcttctacttactacagacaaaccccatgtacctggctaaacttatatttgagatgcctcaaagta aaaccacaaaatttatggaatctgtgattttctccctgttcaactatggggcgaaccaaagagaggaatatttactttct cgtctctttaaaaaggcattggaagaggaaatagcatctaaagttgacaagatgtcagactttgtcacaggaaatcccct agttgtaaagatgattgtaggttataacaggaatcagagaggacagaatgcactccgtgaaatgttgaatcccctcataa cagaggtgatagaggacaaagctctcaggataaatactaaccctgtagaaatatacaaagcttgggtcaatcagatggaa tcaagttctggtaaaaccagtggattgccatacgatgtgaccacagaacaagctttgaagcgtgaagaagtgctggtgat attggaggaatccattcagcagctgacacgggttacggataaattcctcaccaccatcttacaatcactggacaaaattc catatggcatgaggtatatggccaaggttctaaaggcagcattagaacagaagttccctgaggcaccagagaaagatgtt cttaagattgtgggtaacctgctgtattaccgatacattaattcagccatagtggcccctgatgcctttgacattataaa tgtcggagcagacaagcagcttacaaatgaccagagaagaaacctcggatctgtagcgaagatactacaatttgctgcgt ctaacaaagggtttggcggagacagttcttacctggcaagcatgaacgactacatcaggcacgctcacgagaaattcaaa accaagaggatggtggttgatgtgctggcatgtcaacaaggagattctctcatccagattttagagacgcccgtcacgga cgagcaggaagagatccaccaggccctcgtcagaaaacgagatatcagagacaaaaaagtcaccgactccaatgaggaag ggctagtacgacagcagtctattctaggagatacaagattacccatcaaaatcatgaagactaaaatcaagaaaaaccta cagaatctggagctacatgaagtggtaacaaggaagaatggttaccaggaccttatcaatatgatagctcaggatataag aaatcagaggcgatacagaaataacaggaagcaggagctgttaagggtgaagggtacattaaaaagcctgctggaaaaac gtgccttctacgagtctcagattgactactacaacagatatgtcaagacgtgtatagataacctccaacagaaaaagtta aagaatgttcagtttgaaattaaagccactgctgacccaggagtgtttgaggtgaatgccaagtttatgggagtcgaaat ggagaaagtcgaccttgtttttcaggatttgcttcagctacagtatgaaggtgtggccgtaatagaaatgttcaacaaag ccaagatcaacgtcaatctactaatcttcttggtcaataaaaagttttatggacaagtgcggaaatag |
|
Protein
| Protein ID | pfu_aug1.0_4996.1_01874.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4996.1_01874.t1 IIAISNINQTIDKGDPSQTLEALNMPTAKLKDVDEKQDYRYQVLLVREKRKKAESSGDEEAELWVEEIQTAIENGNKDAE VGLKLSQAVELVNKSATDNDLDQLSTALTSPDLTLHSVIPDCMQTYQEKLQEAIDEKSKEGEKGSGWMMNRLKDGSKFYY NTTTKEYKWSKPDGVVKDNGILTKEEIQKVVSDVTAAHDRELLFQSNEGLIVKIQSQYRGYQARKAYRGRMDFIKRQLPA IIKIQEPDVVKIQAFVRSNKAKHDYRALMHEDNPPVSVVQRFVHLLDASDVDYSEEIELQKLRQRVVTEIRSTQQLENDL DQMDIKIGLLIKNRVTLQDVVTHDKKLSKHREDAKTVPKGLKALSKECHDRLEAYQHLFYLLQTNPMYLAKLIFEMPQSK TTKFMESVIFSLFNYGANQREEYLLSRLFKKALEEEIASKVDKMSDFVTGNPLVVKMIVGYNRNQRGQNALREMLNPLIT EVIEDKALRINTNPVEIYKAWVNQMESSSGKTSGLPYDVTTEQALKREEVLVILEESIQQLTRVTDKFLTTILQSLDKIP YGMRYMAKVLKAALEQKFPEAPEKDVLKIVGNLLYYRYINSAIVAPDAFDIINVGADKQLTNDQRRNLGSVAKILQFAAS NKGFGGDSSYLASMNDYIRHAHEKFKTKRMVVDVLACQQGDSLIQILETPVTDEQEEIHQALVRKRDIRDKKVTDSNEEG LVRQQSILGDTRLPIKIMKTKIKKNLQNLELHEVVTRKNGYQDLINMIAQDIRNQRRYRNNRKQELLRVKGTLKSLLEKR AFYESQIDYYNRYVKTCIDNLQQKKLKNVQFEIKATADPGVFEVNAKFMGVEMEKVDLVFQDLLQLQYEGVAVIEMFNKA KINVNLLIFLVNKKFYGQVRK |
|