Gene
| Gene Model ID | pfu_aug1.0_4998.1_67124 |
|---|---|
| Locus | scaffold4998.1 : 17851 ... 23365 : - |
| To GenomeBrowser | scaffold4998.1:17851..23365 |
| Genes list of scaffold | scaffold4998.1 |
| Synonym | pfu_aug2.0_502.1_07603 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4998.1_67124.t1 | 1 | 1 | MMR_HSR1 | 128 | 235 | 2.5e-07 | 30.6 | 1.6e-10 | 4.7e-07 | 29.7 |
| pfu_aug1.0_4998.1_67124.t1 | 1 | 1 | Ras | 129 | 286 | 1.1e-28 | 99.6 | 5.5e-32 | 1.6e-28 | 99.1 |
| pfu_aug1.0_4998.1_67124.t1 | 1 | 1 | Miro | 129 | 241 | 1.6e-13 | 51.2 | 9.9e-17 | 2.9e-13 | 50.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4998.1_67124.t1 | gi|346469349|gb|AEO34519.1| | 4.0e-20 |
Transcript
| Transcript ID | pfu_aug1.0_4998.1_67124.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4998.1_67124.t1 atggttttacctcggacaaacaagcttcgaacctcggtcaaacatcgaaattgcactgtgacgtcaacagctgaagtgat tttgattagagttggtacagaatacaaatcatacaaatcatggacatgtagtgacctgtgtattgccttgtccttcttcg tggacaatattcataaagggggttattttacaccactattgtgcgttcttcgagacctccaggtaatcggaaaagtacga gatgctttcttcgataacgaactaaaacgaacgccgaatcaagaggaagaaaggcaattgagtaaaaggattaagtttga aatggcgggtagaaaattaccagatttggcaacattgagaccaaccaaagatgtcacagttcaaatagcagttctgggtt cgacaaagagtggaaagacagctatgattaaccagtatgtccacaacagatttgtcagtaagtacagtgaaactatagag gatcttcacaagaaggaaaggaaactagaagacctatacgtgatgcaagatattgtggacacatctgggtgtattctgta tgacgtatttagaaagaaagtcatcaagaggtcggatgtatttatattgactttctccttgatcgataagaaatcatttc gtgaaatgaaaaacattcgtcagcaggtgatgactatacatggcagaaatgcgccgattctggtcgtaggtacccatagt gatcatatgaacgggagaatactcaggtacaagacggcaaagacatttgttgagaaatgctggaatcatgtgtacataga atgttcctccaggttccatgacgacgcagagagagtgtttgataaggctgttaggctgttaccactaggaacaacattcc gatcaagactgcgatcaagggatggaaacatatatgttatgtcaaaaacagtggataaaagaaggggacttatcggtata cagtggaagaaagtatactag |
|
Protein
| Protein ID | pfu_aug1.0_4998.1_67124.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4998.1_67124.t1 MVLPRTNKLRTSVKHRNCTVTSTAEVILIRVGTEYKSYKSWTCSDLCIALSFFVDNIHKGGYFTPLLCVLRDLQVIGKVR DAFFDNELKRTPNQEEERQLSKRIKFEMAGRKLPDLATLRPTKDVTVQIAVLGSTKSGKTAMINQYVHNRFVSKYSETIE DLHKKERKLEDLYVMQDIVDTSGCILYDVFRKKVIKRSDVFILTFSLIDKKSFREMKNIRQQVMTIHGRNAPILVVGTHS DHMNGRILRYKTAKTFVEKCWNHVYIECSSRFHDDAERVFDKAVRLLPLGTTFRSRLRSRDGNIYVMSKTVDKRRGLIGI QWKKVY |
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