Gene
| Gene Model ID | pfu_aug1.0_5.1_65164 |
|---|---|
| Locus | scaffold5.1 : 109601 ... 117485 : - |
| To GenomeBrowser | scaffold5.1:109601..117485 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5.1_65164.t1 | 2 | 1 | Homeobox | 13 | 26 | 1.7e-12 | 46.7 | 0.14 | 2000.0 | -1.6 |
| pfu_aug1.0_5.1_65164.t1 | 2 | 2 | Homeobox | 146 | 191 | 1.7e-12 | 46.7 | 1.2e-16 | 1.7e-12 | 46.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5.1_65164.t1 | gi|260826474|ref|XP_002608190.1| | retinal homeobox protein-like protein [Branchiostoma floridae] | 4.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_5.1_65164.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5.1_65164.t1 atgttttgcgaaaaacgcgaaaattttgcgattaaattacgcgttaaagttacgcgttatgaaacgaatgttttgcgaaa aatgcgaaagtttctcgatataacgcgtaaattttgcgtgtttatacgaattttgcgaatagcgcgatataattggaaag tttcgcggtattacactgatgaaacaatggaaacaatcgacagtacaacgcaaattaaaaataacgaacaactacatgta cccataatgattccaaataccactatccagtcaacaagttcgggctctggattactgaaattttccataagcaacatcct gaagctttccgctgatgagccgtcaaacagtttcacaaaagttgatgcagcagcttctacgattcagtcagcgagttcga ttccagaagacgataaagtggaccaattgaaaggaaaacgaaacagaactacattttctacaaaacaactccaagaactc gaacgagctttccggaaaacacattatccggacgttttcctcagagaaaaacttgccttgaaaataaaattaccggaatc aagaatacagctgtatgattttccttcttacttggaatatagaatattggataaactacaaattgattga |
|
Protein
| Protein ID | pfu_aug1.0_5.1_65164.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5.1_65164.t1 MFCEKRENFAIKLRVKVTRYETNVLRKMRKFLDITRKFCVFIRILRIARYNWKVSRYYTDETMETIDSTTQIKNNEQLHV PIMIPNTTIQSTSSGSGLLKFSISNILKLSADEPSNSFTKVDAAASTIQSASSIPEDDKVDQLKGKRNRTTFSTKQLQEL ERAFRKTHYPDVFLREKLALKIKLPESRIQLYDFPSYLEYRILDKLQID |
|