Gene
| Gene Model ID | pfu_aug1.0_5.1_65172 |
|---|---|
| Locus | scaffold5.1 : 251126 ... 265315 : + |
| To GenomeBrowser | scaffold5.1:251126..265315 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug2.0_270.1_00526 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5.1_65172.t1 | 9 | 1 | zf-met | 7 | 14 | 0.0 | 157.2 | 0.0032 | 5.3 | 7.3 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 1 | zf-C2H2_jaz | 7 | 33 | 2.4e-35 | 119.8 | 0.0018 | 3.0 | 8.1 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 1 | zf-C2H2_2 | 7 | 35 | 2.3e-16 | 59.7 | 0.12 | 200.0 | 2.1 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 2 | zf-C2H2_2 | 31 | 76 | 2.3e-16 | 59.7 | 0.00058 | 0.96 | 9.6 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 2 | zf-met | 47 | 71 | 0.0 | 157.2 | 2.8e-10 | 4.7e-07 | 29.7 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 2 | zf-C2H2_jaz | 47 | 72 | 2.4e-35 | 119.8 | 1.8e-06 | 0.003 | 17.6 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 3 | zf-C2H2_2 | 49 | 138 | 2.3e-16 | 59.7 | 0.00019 | 0.31 | 11.1 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 3 | zf-C2H2_jaz | 111 | 134 | 2.4e-35 | 119.8 | 0.0002 | 0.33 | 11.1 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 4 | zf-C2H2_2 | 226 | 258 | 2.3e-16 | 59.7 | 5.0e-05 | 0.083 | 13.0 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 3 | zf-met | 227 | 250 | 0.0 | 157.2 | 8.0e-08 | 0.00013 | 22.0 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 4 | zf-C2H2_jaz | 227 | 251 | 2.4e-35 | 119.8 | 4.6e-06 | 0.0076 | 16.3 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 5 | zf-C2H2_2 | 297 | 337 | 2.3e-16 | 59.7 | 2.2e-05 | 0.037 | 14.1 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 4 | zf-met | 298 | 321 | 0.0 | 157.2 | 1.3e-08 | 2.1e-05 | 24.5 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 5 | zf-C2H2_jaz | 298 | 322 | 2.4e-35 | 119.8 | 1.2e-06 | 0.002 | 18.2 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 5 | zf-met | 375 | 398 | 0.0 | 157.2 | 2.2e-07 | 0.00036 | 20.6 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 6 | zf-C2H2_2 | 375 | 403 | 2.3e-16 | 59.7 | 0.00048 | 0.79 | 9.8 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 6 | zf-C2H2_jaz | 376 | 399 | 2.4e-35 | 119.8 | 7.0e-05 | 0.11 | 12.6 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 6 | zf-met | 456 | 479 | 0.0 | 157.2 | 3.8e-09 | 6.3e-06 | 26.2 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 7 | zf-C2H2_2 | 456 | 483 | 2.3e-16 | 59.7 | 0.00032 | 0.53 | 10.4 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 7 | zf-C2H2_jaz | 457 | 479 | 2.4e-35 | 119.8 | 3.3e-08 | 5.4e-05 | 23.2 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 7 | zf-met | 500 | 524 | 0.0 | 157.2 | 2.3e-09 | 3.8e-06 | 26.8 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 8 | zf-C2H2_2 | 500 | 527 | 2.3e-16 | 59.7 | 0.002 | 3.3 | 7.8 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 8 | zf-C2H2_jaz | 501 | 525 | 2.4e-35 | 119.8 | 5.8e-07 | 0.00096 | 19.2 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 9 | zf-C2H2_2 | 555 | 583 | 2.3e-16 | 59.7 | 0.26 | 420.0 | 1.1 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 8 | zf-met | 557 | 580 | 0.0 | 157.2 | 8.1e-08 | 0.00013 | 22.0 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 9 | zf-C2H2_jaz | 558 | 581 | 2.4e-35 | 119.8 | 0.0008 | 1.3 | 9.2 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 10 | zf-C2H2_2 | 872 | 946 | 2.3e-16 | 59.7 | 3.6e-06 | 0.0059 | 16.7 |
| pfu_aug1.0_5.1_65172.t1 | 10 | 10 | zf-C2H2_jaz | 918 | 943 | 2.4e-35 | 119.8 | 6.6e-09 | 1.1e-05 | 25.4 |
| pfu_aug1.0_5.1_65172.t1 | 9 | 9 | zf-met | 919 | 943 | 0.0 | 157.2 | 7.0e-08 | 0.00011 | 22.2 |
| pfu_aug1.0_5.1_65172.t1 | 1 | 1 | DEAD | 982 | 1161 | 7.2e-12 | 45.1 | 1.5e-14 | 2.5e-11 | 43.3 |
| pfu_aug1.0_5.1_65172.t1 | 1 | 1 | ResIII | 994 | 1160 | 2.5e-09 | 37.2 | 1.7e-11 | 2.8e-08 | 33.8 |
| pfu_aug1.0_5.1_65172.t1 | 1 | 1 | Helicase_C | 1441 | 1503 | 2.2e-15 | 56.2 | 4.5e-18 | 7.5e-15 | 54.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5.1_65172.t1 | gi|111226989|ref|XP_001134628.1| | hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5.1_65172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5.1_65172.t1 atggcatctcccaaatcttggtactgtgagctgtgtaataaaggtccgtttggcggacccaaaccttggaatgaacatct gaatagtcagtgccacaaactgaaggacatactacaatacactgccaaacaaaatccttttttctgcgatgtttgtaatg taactacaaatagtcaagacagcttggcccaacatctatcaagtccaagacataaggctgcaaaggacagggcacatgaa ataaattgtatgaaagataatcagaatcgcagaaataccagtgacaatggaggatctgtccagagaaccctcttcaatag aagcgtttcttgcaatgcatgtggagaagtcttccatgatcatgttcgtgctgagcaacatttttcaagtgaagcccata gaagaaatgccgaatttgaagaaagggattcagtggatttgtcatcaagtctcaatccttttgatggatcaagcaggcag acattgtccattattccacaagagaatttagttagtatacatggaaacggacatggaacagacacagtgactaggcaaat aaactttgagcaacaaatgaaacagctagacttagacatggaagaagaggttcctcacttaaggagagaaacagaaaata gtccagcggaagaatatacttttagtggaagtaggggctattgctatatatgcaatttggagttaacctctcgtcctcac gctgatcaacatttgaacgggaaaagtcacaaaaaagcaaaggaaaagtctggtcaggctaaaatgcctcctcttcttca caatcgggaacaagctattcctgcactcaataaatctaccaaggaggcaatatctaataggaaagaatatatatttgatg gatcaagagggtactgccatgtgtgtgaaactgagctaacatctcagcttcaagctgagcagcatttacagggacaaaaa cataaaaaagcggtagaaaaatccactgtgaacaaggcacatcaagatttttcccctcggacaaatggtcatggtgaaca agctattccgaatcacaataagcctcccagtgaagctaaaatctctcagcccaaggaatatacatttgatggattgagag ggcactgctatgtatgtgatcttgagcttacatctaaagctcatgcagagcagcatttaaaaggacagaaacatagaaaa gctgtggagagatcttcagttaacaatgtgcatcgacagggtgcccctgagataatagggcaagttaatcaactacaaca gcaggcaaggcaagggatcgctccaatgaatggcaagatacaaaaggacagtagccgtgaatatgaatggtacggaaaca gaggatggtgtaatatctgtgacgtagagctttcttctgagcagcagaaacaacaacatctaaatggaaagaatcatgag aaaaacaaaaagaaaggaatatacatgtatggtgcaggtggtgatcgaaatttaccattgcactgtaaggtatgtgacaa gcaattttctggaccagaaagtgctgcaatgcattatgctagtgccaaacataaacagaaggcccaattagtgggtggtg aagactacaatatggcagtacagggagcagagccttttcatctggggcaagacagaacacagtgggtgaaatgtgaggtc tgcctgtgtctcctaaattctgaggagcagttggagattcataaaagaagtccaaagcacaaagcagagttagataagaa gcttcgaaggaaggaccaaggtgatatactgtttagcagagatcaacttccccagactcagcagtctgcaaacgaagaac ttcaactgcctgtgtcacatataagcttcaaacactctcatattcatggacagagacccgcatatcctcttgaaaataat tcaaataacaattcagaaaatccaccacccataccagggactaaagggcctcaatcaagtactgatcctttcaatttatc tttcggtttggaacaaatcagtcaaaatctgagtcaaggattcctaatcaacaaaatttcatttggagagttatgcccag aagacagtttgaatgatggaaacagtagcgtagtgcaatattcagttgctgagattgaaacaactccgaagactgccatg tctgttgtggaaaatatggaaaagtacaatttcttgaaagagaatcccaatgtttggaaggaagaaaaagcttcaccaga tgtcagtttaggactttactcagggtttaaagaagaagaaaatggtaatccaaatcaagatagtatgctgtcatttgcaa gcagttcatcagggtatagtactgccagtgaaggtaaaattgctgactgcgacattgcaggactgcccgttcaacagaag agaagtacaggaagtgatgtcgctcgtgctttgaaaaataggcagaggaaaagcaatgcaaggaaaggtgaaggtcacat cctggatgaggaaaatgacacattggtgcctgaagctgattgtgaagtttcgaagaagtacgaggaggaagctgcagcga tgataagaaaaaaccttgaggtcatagaagaaaatagaactttgggtcgaggtcatcatttgcagagtgaacattgcctg caagcttctcaatctcgtattcaagcacttcataatgcacaacagtatttaaagcataatggaaatgacgcaagagcaat taccaaggtggaaagcccatttgcatatcataagttttactgtagtacatgtaataggcctatgaatactgagaaagctt acagggagcatatgcgaggtcaaggtcatatgcagaaggtggctactgaacctgctccaagtagaaaccattctcctctt ctcaagaaatttgaagattatggcaacttgaactttgaccttactaagacagttcctaggggataccaaagagaactatt cacaaaagctatggagggagatactgtcctatttttgccaacaggaactggaaagacgttgatatcttgtttggcagtga gcgcgatgctgacccagaatcccacaagacaagtagttttcctggtggataaagtattattagtaatacagcagtcccga tacctcatcaatgagctgggagataggaattatacaaggtttgaccctgacaacgttaatagtccagactcccacaatca gctaatggacagaaaactgaggatagcggctctatgtgggggacaacagtctacgggcggagtgccattatggaaacatg acctcatcattgtaactgcagctttctatgagaacctgctcagccaaggtgtactgaagtggacagatctgtcgctggtt gtgtttgacgaggctcatcactgtgggaagaaccatccatttaaccgactcctacaggagcatcaactaccgaaggcagg ctctgtacgaccaaaagtactgggactgactgcatccccggctggtagaccaacagttgatgagacgttagacatgctga aatacttcatggcaaacttgggtcatgcaaagatggccattgtggagaagaataagacagaacttgaaagctatcagtct aacgcactggtgaaagtgataacagcagaaagtagtgccaaagaagaatccttacgacttcaacttcagttgtatctgct ggagtcctataccaaattctgtgctgagacggatatgttagacaagtataacctaggccttcaagccacgtcaaaacgca acttgtcaaagaaagagctgattgaatgtgcggaaacccttgagggtgacctacttaactcactggaagtcaccttggac aaggccagtccaaagagcaataatgcggcacacaggttgatagtcgcaaatttgtcaacccacattaagtatgtttgtta tgctttgaattcgttgtttgaggctggagtaccgttagcgctagaggaacttcaaattctcatggctgccagagaatcaa gtggatttgagtttgccaaaagtctggggctgaagtgcgatgatttgcttgcggaatatgattcttgccaagaggtggag ctatcgacaacgagagaaatggcaggcaggccgcatctcacgtccaagataaattgtctgattaaaagcttgttgagctt ggagaacatagactggaggaagagggaggagagacccatggcactggttctggtcaagcagaggtccacggcaaaaatgg tgtgcagcattctacagtcggaaagtatggtgaagtcattgggtctgagtgttgtgtatgtagtgggtcatggggcagga tctgccgagggtggaatgaccgttagtcagcagaaacgtctgttggaagaggtgaaagctcatcgccatcaaattattgt tgcaacctctgtagccgaagaaggaattgatatcccagaatgccagctggtggtgtcgatgaatcctccatcgactgtaa cggctcttgttcagatgagaggcagggcaaggaagatacagagcaagtttgttataatctgtactgacgtcaatgagaaa gcaaaaatggaggatcttcagctcaaagaaaacaacatgaccaaagcaacggcaattattgttagagagcaacgtcaaca acgttag |
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Protein
| Protein ID | pfu_aug1.0_5.1_65172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5.1_65172.t1 MASPKSWYCELCNKGPFGGPKPWNEHLNSQCHKLKDILQYTAKQNPFFCDVCNVTTNSQDSLAQHLSSPRHKAAKDRAHE INCMKDNQNRRNTSDNGGSVQRTLFNRSVSCNACGEVFHDHVRAEQHFSSEAHRRNAEFEERDSVDLSSSLNPFDGSSRQ TLSIIPQENLVSIHGNGHGTDTVTRQINFEQQMKQLDLDMEEEVPHLRRETENSPAEEYTFSGSRGYCYICNLELTSRPH ADQHLNGKSHKKAKEKSGQAKMPPLLHNREQAIPALNKSTKEAISNRKEYIFDGSRGYCHVCETELTSQLQAEQHLQGQK HKKAVEKSTVNKAHQDFSPRTNGHGEQAIPNHNKPPSEAKISQPKEYTFDGLRGHCYVCDLELTSKAHAEQHLKGQKHRK AVERSSVNNVHRQGAPEIIGQVNQLQQQARQGIAPMNGKIQKDSSREYEWYGNRGWCNICDVELSSEQQKQQHLNGKNHE KNKKKGIYMYGAGGDRNLPLHCKVCDKQFSGPESAAMHYASAKHKQKAQLVGGEDYNMAVQGAEPFHLGQDRTQWVKCEV CLCLLNSEEQLEIHKRSPKHKAELDKKLRRKDQGDILFSRDQLPQTQQSANEELQLPVSHISFKHSHIHGQRPAYPLENN SNNNSENPPPIPGTKGPQSSTDPFNLSFGLEQISQNLSQGFLINKISFGELCPEDSLNDGNSSVVQYSVAEIETTPKTAM SVVENMEKYNFLKENPNVWKEEKASPDVSLGLYSGFKEEENGNPNQDSMLSFASSSSGYSTASEGKIADCDIAGLPVQQK RSTGSDVARALKNRQRKSNARKGEGHILDEENDTLVPEADCEVSKKYEEEAAAMIRKNLEVIEENRTLGRGHHLQSEHCL QASQSRIQALHNAQQYLKHNGNDARAITKVESPFAYHKFYCSTCNRPMNTEKAYREHMRGQGHMQKVATEPAPSRNHSPL LKKFEDYGNLNFDLTKTVPRGYQRELFTKAMEGDTVLFLPTGTGKTLISCLAVSAMLTQNPTRQVVFLVDKVLLVIQQSR YLINELGDRNYTRFDPDNVNSPDSHNQLMDRKLRIAALCGGQQSTGGVPLWKHDLIIVTAAFYENLLSQGVLKWTDLSLV VFDEAHHCGKNHPFNRLLQEHQLPKAGSVRPKVLGLTASPAGRPTVDETLDMLKYFMANLGHAKMAIVEKNKTELESYQS NALVKVITAESSAKEESLRLQLQLYLLESYTKFCAETDMLDKYNLGLQATSKRNLSKKELIECAETLEGDLLNSLEVTLD KASPKSNNAAHRLIVANLSTHIKYVCYALNSLFEAGVPLALEELQILMAARESSGFEFAKSLGLKCDDLLAEYDSCQEVE LSTTREMAGRPHLTSKINCLIKSLLSLENIDWRKREERPMALVLVKQRSTAKMVCSILQSESMVKSLGLSVVYVVGHGAG SAEGGMTVSQQKRLLEEVKAHRHQIIVATSVAEEGIDIPECQLVVSMNPPSTVTALVQMRGRARKIQSKFVIICTDVNEK AKMEDLQLKENNMTKATAIIVREQRQQR |
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