Gene
| Gene Model ID | pfu_aug1.0_500.1_15098 |
|---|---|
| Locus | scaffold500.1 : 32296 ... 36968 : + |
| To GenomeBrowser | scaffold500.1:32296..36968 |
| Genes list of scaffold | scaffold500.1 |
| Synonym | pfu_aug2.0_3262.1_09092 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | hypothetical protein |
| Description | similar (28%) to XP_003200236.1| PREDICTED: chemokine-like receptor 1-like [Danio rerio |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_500.1_15098.t1 | 2 | 1 | 7TM_GPCR_Srw | 45 | 134 | 2.9e-06 | 26.6 | 0.00044 | 1.1 | 8.3 |
| pfu_aug1.0_500.1_15098.t1 | 1 | 1 | 7tm_1 | 67 | 311 | 9.1e-26 | 90.5 | 4.6e-29 | 1.1e-25 | 90.2 |
| pfu_aug1.0_500.1_15098.t1 | 2 | 2 | 7TM_GPCR_Srw | 193 | 311 | 2.9e-06 | 26.6 | 1.6e-08 | 3.9e-05 | 22.9 |
Transcript
| Transcript ID | pfu_aug1.0_500.1_15098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_500.1_15098.t1 atggaggtaacaacaggtaatatccagtcaaacatctcaatctacaaagaaacaacagatggatacaatgggtatggtag aatagctgagtgtgtcttctctgtcacgctaactattgttggtttaataggaaattcccatgctctcatcataaatgttc aaagattccgatcccaaaggaaggaaagaacagtagaaaagaacccgtatatagtatttgttctcagccttgcaatcctc gacatgtttacttccttagttattttaccgttgggcaatgccgatttggcatacaggttcacaccatattcagacgatat gtgcaagtttttccgatatctgcagtttgtcatacatatcagcagtgtccttcacatcgccttgatcagcatccattgtt gtcgtcaggtgtgtttcccaagatcaaggcagatcaacggcaaatatgcattcaggttctgtgtatgtttcgacttgttc tcagctacaggagctgtaattgtcatctttctatcaggaaataagactataaccattgatggtgtgacaggagcattttg ttttatcggccaaagcagcaataaccctatgtttctacgcatcgccatgaccatcctatcagtttgttttctcatctgtc tggtcgtcataatatcatgttattgtgctttgattgtacacagattgcgtaaaagaaaatcaaagtccgaccgctccatg acccaggacgaaataaaactccagaagacaattgttacccttattatcttaacaacttcatttgtgatcgcctacatacc tttcatgatactagcagtcattaaagctgtcgacaaggactttcaaaataacttaagcggagcaagttctgctgcacacg gaatattcctccgctttccactcgtgaataatgtcgttaatccgtttatttatggtctcaaagacttagagtttagaaga aggttattgaatatgtatccttgtttgaaatcttcctag |
|
Protein
| Protein ID | pfu_aug1.0_500.1_15098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_500.1_15098.t1 MEVTTGNIQSNISIYKETTDGYNGYGRIAECVFSVTLTIVGLIGNSHALIINVQRFRSQRKERTVEKNPYIVFVLSLAIL DMFTSLVILPLGNADLAYRFTPYSDDMCKFFRYLQFVIHISSVLHIALISIHCCRQVCFPRSRQINGKYAFRFCVCFDLF SATGAVIVIFLSGNKTITIDGVTGAFCFIGQSSNNPMFLRIAMTILSVCFLICLVVIISCYCALIVHRLRKRKSKSDRSM TQDEIKLQKTIVTLIILTTSFVIAYIPFMILAVIKAVDKDFQNNLSGASSAAHGIFLRFPLVNNVVNPFIYGLKDLEFRR RLLNMYPCLKSS |
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