Gene
Gene Model ID | pfu_aug1.0_500.1_15100 |
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Locus | scaffold500.1 : 71526 ... 75091 : + |
To GenomeBrowser | scaffold500.1:71526..75091 |
Genes list of scaffold | scaffold500.1 |
Synonym | pfu_aug2.0_165.1_17051 |
Manual annotation
Study field | other |
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Gene name | hypothetical protein |
Description | similar to ABH10673.1| neuropeptide Y [Haliotis discus hannai; ABO77113.1| gonadotropin-releasing hormone receptor 1a [Branchiostoma floridae |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_500.1_15100.t1 | 1 | 1 | 7tm_1 | 63 | 311 | 1.9e-30 | 105.8 | 1.1e-33 | 2.4e-30 | 105.5 |
Transcript
Transcript ID | pfu_aug1.0_500.1_15100.t1 |
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Definition | - |
>pfu_aug1.0_500.1_15100.t1 atggatgtgtcaacagctactatccagtcaaatatctcgatctacaatgaaacaacagatggatatagcgggtacaatag aaaagcagggtttgtctactctgtcacactcaccataattggcataatagggaattctcatgctctcatcatatattttc aaagattcaggtcacagagaaggcaaagaagagtagaaaagaatccgtatatagtatttgttctcagccttgcaatcctc gacatgtttacttccttagttattttaccgatggacaatgctgatttggcatacaggttcacaccatattcagacggaat gtgcaagttttttcgatatctacagtttgtcattcatgtcagcagcgtcctccacatcgtcttgatcagcattcattgtt ggcgtcaagtatgtcacccactctcccgacagatcaacaacaaagaagcattcatattctgtatattttttgacgcgtta gctgcctcaggagctgtaatggtgatatttctatccggaaataaaactaaaaccattgatggtgtggttggggcacggtg ttacattggcgaaagcagcgacaaccctatgtttctacgcattgccatgactttcctatcaatttgttttgtcatctgcc tgatcgtcattattgcttgttattgtgctctgattgtcaacagatggcgtgaaagaaaatcaaattcagaccgctccatg acccaggacgaaataaaacttcagaagataatcgctacccttattatcttatcagctttatttgtgatcgcgtacatacc tttcatgatacttgcagccattaaagctgtcgacaaggagtttcaaaataacttaagcggagcaagttctgctgcacacg gaatattcatccgctttccactcgtgaacaatgtcgttaatccgtttatttatggtctgaaagacttagagtttagaaga aggttatttgatatgtatccatgtttgaaatcttccaagacacatgagattgaaatcggttctattccttctccagaata g |
Protein
Protein ID | pfu_aug1.0_500.1_15100.t1 |
---|---|
Definition | - |
>pfu_aug1.0_500.1_15100.t1 MDVSTATIQSNISIYNETTDGYSGYNRKAGFVYSVTLTIIGIIGNSHALIIYFQRFRSQRRQRRVEKNPYIVFVLSLAIL DMFTSLVILPMDNADLAYRFTPYSDGMCKFFRYLQFVIHVSSVLHIVLISIHCWRQVCHPLSRQINNKEAFIFCIFFDAL AASGAVMVIFLSGNKTKTIDGVVGARCYIGESSDNPMFLRIAMTFLSICFVICLIVIIACYCALIVNRWRERKSNSDRSM TQDEIKLQKIIATLIILSALFVIAYIPFMILAAIKAVDKEFQNNLSGASSAAHGIFIRFPLVNNVVNPFIYGLKDLEFRR RLFDMYPCLKSSKTHEIEIGSIPSPE |