Gene
| Gene Model ID | pfu_aug1.0_5002.1_67129 |
|---|---|
| Locus | scaffold5002.1 : 1 ... 18135 : - |
| To GenomeBrowser | scaffold5002.1:1..18135 |
| Genes list of scaffold | scaffold5002.1 |
| Synonym | pfu_aug2.0_12.1_06733 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5002.1_67129.t1 | 8 | 1 | LRR_6 | 91 | 111 | 1.1e-19 | 68.2 | 0.0002 | 0.37 | 11.0 |
| pfu_aug1.0_5002.1_67129.t1 | 7 | 1 | LRR_1 | 93 | 103 | 2.1e-06 | 26.9 | 0.21 | 380.0 | 1.8 |
| pfu_aug1.0_5002.1_67129.t1 | 5 | 1 | LRR_4 | 113 | 130 | 2.8e-07 | 30.0 | 0.011 | 20.0 | 4.9 |
| pfu_aug1.0_5002.1_67129.t1 | 8 | 2 | LRR_6 | 118 | 138 | 1.1e-19 | 68.2 | 3.7e-07 | 0.00068 | 19.4 |
| pfu_aug1.0_5002.1_67129.t1 | 5 | 2 | LRR_4 | 120 | 156 | 2.8e-07 | 30.0 | 0.071 | 130.0 | 2.3 |
| pfu_aug1.0_5002.1_67129.t1 | 7 | 2 | LRR_1 | 121 | 132 | 2.1e-06 | 26.9 | 0.094 | 170.0 | 2.8 |
| pfu_aug1.0_5002.1_67129.t1 | 8 | 3 | LRR_6 | 147 | 165 | 1.1e-19 | 68.2 | 0.32 | 590.0 | 1.1 |
| pfu_aug1.0_5002.1_67129.t1 | 5 | 3 | LRR_4 | 151 | 188 | 2.8e-07 | 30.0 | 0.038 | 70.0 | 3.2 |
| pfu_aug1.0_5002.1_67129.t1 | 8 | 4 | LRR_6 | 175 | 192 | 1.1e-19 | 68.2 | 0.0022 | 4.1 | 7.7 |
| pfu_aug1.0_5002.1_67129.t1 | 7 | 3 | LRR_1 | 176 | 188 | 2.1e-06 | 26.9 | 0.0078 | 15.0 | 6.1 |
| pfu_aug1.0_5002.1_67129.t1 | 8 | 5 | LRR_6 | 203 | 223 | 1.1e-19 | 68.2 | 2.1e-05 | 0.04 | 13.9 |
| pfu_aug1.0_5002.1_67129.t1 | 5 | 4 | LRR_4 | 204 | 242 | 2.8e-07 | 30.0 | 7.9e-06 | 0.015 | 14.9 |
| pfu_aug1.0_5002.1_67129.t1 | 7 | 4 | LRR_1 | 204 | 215 | 2.1e-06 | 26.9 | 0.007 | 13.0 | 6.2 |
| pfu_aug1.0_5002.1_67129.t1 | 8 | 6 | LRR_6 | 229 | 251 | 1.1e-19 | 68.2 | 0.0052 | 9.6 | 6.6 |
| pfu_aug1.0_5002.1_67129.t1 | 7 | 5 | LRR_1 | 231 | 243 | 2.1e-06 | 26.9 | 0.23 | 430.0 | 1.6 |
| pfu_aug1.0_5002.1_67129.t1 | 8 | 7 | LRR_6 | 257 | 272 | 1.1e-19 | 68.2 | 0.16 | 300.0 | 2.0 |
| pfu_aug1.0_5002.1_67129.t1 | 7 | 6 | LRR_1 | 260 | 271 | 2.1e-06 | 26.9 | 0.82 | 1500.0 | -0.1 |
| pfu_aug1.0_5002.1_67129.t1 | 5 | 5 | LRR_4 | 279 | 300 | 2.8e-07 | 30.0 | 0.00038 | 0.7 | 9.5 |
| pfu_aug1.0_5002.1_67129.t1 | 8 | 8 | LRR_6 | 285 | 302 | 1.1e-19 | 68.2 | 0.00043 | 0.79 | 9.9 |
| pfu_aug1.0_5002.1_67129.t1 | 7 | 7 | LRR_1 | 288 | 307 | 2.1e-06 | 26.9 | 0.002 | 3.8 | 7.9 |
Transcript
| Transcript ID | pfu_aug1.0_5002.1_67129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5002.1_67129.t1 atgtctcgatctgctagaaaggcctttataacagaattggcagtaagatcagacgacgatgacgacgacgacaatgtaga tgaagaggaaggtcaaggccgaagggattccagcggtcagattgaatacggcagagcttgtaaaagatgtggagttgtcc cgctgtccgttttcaagaaacaattaaaaggattaaacatgtctcttaaattccaaaaactgaacccgagggccacaaag gcttgcaccatggggcttatgtttaactggaccatcagcagtttagacctacaaggctgtgagattggaccaatgggaac aaagtatttatgtgacgtactccagcagaaaccgaacatatcagacctaaatctgtccagtaacaagctgggtaccgagg gcttgaagcatctcaccaggcttctacagagcaatcattctgtcataaacctcgacattgcacataatgatttcaacgaa agcgacgcaatctacataaaagaaatcttggagggtgacaatagtgtgacagaactacgactcagtcataataaattctg tgaggatggagggcgtattatagcaagtggtctcgttaacaacgatttcctgaaggtgcttgacctgagctggaatcacc taagaggtgccggggcgtcagctctaggcttttcactcatgaaaaatactcatttagaagttttaaatgttgcctggaac ggttttgagattccgggttgccatggcttgggtcatggactggagggtaataaaaccctcatagagctgaatgtaggaac taaccgcatagggcttacagcgctatgtaaattactggaggggctcaagtacaactcaactttagaaagacttaatcttg cagacaatccattgacgtctagaggaactcttctggtgctacaggtcatagaaaaatgctcaaacgtcaaaaatgtggat tttgggatgcatccagtagaagaggaactacttgataaactaagagaaatccaggaaataaaacctcttacagtgcttca tggaaaggtgcaccttaaaacgaaaataggagacggggatcctacgatgtatttatccggagatcctatttgtatattat tcgaatttgcaaggataaaagaaattcctattctagaccttttcatcgcatttgatactgacgatagtcactcattaaca tgggatgaattcaaagaaggccttttgcctgatcctaaacaagagaacgacaagaacttttttcttctcggaatggaacc ggttgtttgtgttcgagctattgatgttccctag |
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Protein
| Protein ID | pfu_aug1.0_5002.1_67129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5002.1_67129.t1 MSRSARKAFITELAVRSDDDDDDDNVDEEEGQGRRDSSGQIEYGRACKRCGVVPLSVFKKQLKGLNMSLKFQKLNPRATK ACTMGLMFNWTISSLDLQGCEIGPMGTKYLCDVLQQKPNISDLNLSSNKLGTEGLKHLTRLLQSNHSVINLDIAHNDFNE SDAIYIKEILEGDNSVTELRLSHNKFCEDGGRIIASGLVNNDFLKVLDLSWNHLRGAGASALGFSLMKNTHLEVLNVAWN GFEIPGCHGLGHGLEGNKTLIELNVGTNRIGLTALCKLLEGLKYNSTLERLNLADNPLTSRGTLLVLQVIEKCSNVKNVD FGMHPVEEELLDKLREIQEIKPLTVLHGKVHLKTKIGDGDPTMYLSGDPICILFEFARIKEIPILDLFIAFDTDDSHSLT WDEFKEGLLPDPKQENDKNFFLLGMEPVVCVRAIDVP |
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