Gene
| Gene Model ID | pfu_aug1.0_5003.1_23707 |
|---|---|
| Locus | scaffold5003.1 : 1 ... 13534 : + |
| To GenomeBrowser | scaffold5003.1:1..13534 |
| Genes list of scaffold | scaffold5003.1 |
| Synonym | pfu_aug2.0_28.1_26679 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5003.1_23707.t1 | 1 | 1 | Aminotran_4 | 74 | 301 | 9.3e-20 | 71.0 | 8.1e-24 | 1.2e-19 | 70.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5003.1_23707.t1 | gi|55741952|ref|NP_001006740.1| | branched-chain-amino-acid aminotransferase, mitochondrial [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5003.1_23707.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5003.1_23707.t1 ccagacttcaacaaccttaaatttggccaaacatttagtgatcacattttagaagtggaatggagcatcaaaagaggatg ggggaagccttctatcagacctatgcataacttatcacttcaccctgcctctaaggtcttacactatgctgtagagttgt ttgaaggcatgaaagcatataaaggagaagatggtaaaatcagaatgttccgtcccttggagaacatgataaggatgaac agcaccgcacaacgcagttgtctccctacgtttgatggggaggagttgatagaatgtatgaagacgttgatcagtataga caaggattgggtaccagactccaggaccagctcactgtatatacgtcccactatgattggtacagagccacagctgggag tgtctagaccagaaagtgctttactttttgtcattataggtccagtaggggcgtactaccccactggcttgaaacccgtt acattattggctgatcctaaatatgtacgagcctggccgggtggcagtggacaatacaagatgggagcaaactatggtcc cacattgtcagttggacaagatgcagaaaaacaaggctgtcagcaggtactctggttatatggggaagatcagcaagtaa cggaagttggagccatgaatatatttatgtactggatcaatgaacaaggagagaaggagcttatcactgctcccctgaat ggactaatcctacctggaataacacggaagagtttattagagcttgccagggggtggggagagtacaaggtatcagaaag agaatataccatgggagacattgtaaaaggtctgaaagaaaacagagttaaggagttatttggtgctggtacagcttgtg tcgtttgtccggtagaaaagatactgtacaataacgagatgttacaaattcccaccatgtctgaaggtgctcctgtggcc atgaagttctataatactttactggatattcaggctgttaatcgaagtgtgatactgaccatattgatcttgaaaaggtt acttgtatgttga |
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Protein
| Protein ID | pfu_aug1.0_5003.1_23707.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5003.1_23707.t1 PDFNNLKFGQTFSDHILEVEWSIKRGWGKPSIRPMHNLSLHPASKVLHYAVELFEGMKAYKGEDGKIRMFRPLENMIRMN STAQRSCLPTFDGEELIECMKTLISIDKDWVPDSRTSSLYIRPTMIGTEPQLGVSRPESALLFVIIGPVGAYYPTGLKPV TLLADPKYVRAWPGGSGQYKMGANYGPTLSVGQDAEKQGCQQVLWLYGEDQQVTEVGAMNIFMYWINEQGEKELITAPLN GLILPGITRKSLLELARGWGEYKVSEREYTMGDIVKGLKENRVKELFGAGTACVVCPVEKILYNNEMLQIPTMSEGAPVA MKFYNTLLDIQAVNRSVILTILILKRLLVC |
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