Gene
| Gene Model ID | pfu_aug1.0_5003.1_23711 |
|---|---|
| Locus | scaffold5003.1 : 59366 ... 72252 : + |
| To GenomeBrowser | scaffold5003.1:59366..72252 |
| Genes list of scaffold | scaffold5003.1 |
| Synonym | pfu_aug2.0_1653.1_11793 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5003.1_23711.t1 | 1 | 1 | TMEM154 | 293 | 399 | 3.8e-06 | 26.6 | 2.1e-09 | 3.8e-06 | 26.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5003.1_23711.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5003.1_23711.t1 atgtatataacgacttgtattgttttgggactagcagtatggcattcaaatgtatataaagccgcagcacaacttgacga gacatcaaatcgaacattcgcatgttacggcaccgccaattctctgttatcacccagttgtccctctgggtctctggtag caccatatcaggtctctgccggagccaagactaatgccacgggatgtcccagggagatcgtcgacccagcccaggcggat gtgtgctgtgtctttgactctaatgactgccatggtgaatacctgaacgtggatagtcagagtacgtcctatatatacca tgcagattgtgtgggacgtgagaactgtgtgggttttgcacgacaagcatctaatatggacattaattacctgtcttgtt caccctccttcacctaccctgaccagaccaactacatgtttatggacttctactgtataccaggtacacgagttggtacc atctcgtcagccaatattcagagcagtacggacatgatctacctcagaggtcaagactacacaacatcaggcatcgccgt gacgtcagcttcctgttctgtcgaatctgacgactgtgatgtcatcatctccgtgtacgcccttgacctaagactagcaa acgattccacaggcgcctgtatccaagaactttcattgtctggcaccgtcttggattgttcagatgacaataacttcaag atcaatgagatttatcagagttccaacaattatatgactgtaaacttaagcagcactgccaccaatgatgggtatttctg gattggatttaacacctcctcttcaagcagcgacattctgacactgagatgccccgcccagagtcaacagactgtgtgta ccaccaccaccaccgagcccacgacagtcaccaccgacataacgacggaaaaggccactgataattcaacagacaatacc acagaggaaacaacgacagagatgaccaacacaacgatgcaaagcccactacctgcacatgagggtagagcatcaagtat cagttggggggttgtcatagcagtggtagtaatcatcttggtagttatcgtaggtgtagttgtaatcgtcgtttactgca ttaaaaaaggaaaagaagatggccaaggacaaggtcacagatttcaaatggatgcagataaaagctctactgagaacgac tcggacagttttcctcaagataaagctccagtcatcacaaactctaatcctccaacgaccacaagactaaatactccttc acagcagaaaaatggtattactacaccgcttattgaaagtaatttaccgccattgaatcaaacaaacattaaaatggatg tagaggatacagagagtagactatcaactgacgtgccactggcaaaggagcgggaaaaagatagcttaacaaacttgaga accatgaatccaatcggacttgaaattgatatgccgcaggcttcaggatcacaattgccttttgaatcgacagaaaaaca gaaaaagaagaaaaagaaaaagaaaaagagaaagacaattgacagggaagaaaataagccagttgatgatgagttaaaag aaccacaagaggtacctcctggtgacgaagctgaggcaccacttcctgatagtagtgaagttatcaacgaagaaagaaag aaaaagaaacgaaagaaaaagagaaccgaagtaagtgatgaaaatgacaatatcgatgtcactggcgatggtcaggacaa tagggagaagagaaaaaagaaaaagaaaaagaagaaattggagaaaattgacgaaagaacgatggacgattttatcaagg atcacgaagaaaataaaccttttcacaatcaagttgcacctgtttag |
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Protein
| Protein ID | pfu_aug1.0_5003.1_23711.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5003.1_23711.t1 MYITTCIVLGLAVWHSNVYKAAAQLDETSNRTFACYGTANSLLSPSCPSGSLVAPYQVSAGAKTNATGCPREIVDPAQAD VCCVFDSNDCHGEYLNVDSQSTSYIYHADCVGRENCVGFARQASNMDINYLSCSPSFTYPDQTNYMFMDFYCIPGTRVGT ISSANIQSSTDMIYLRGQDYTTSGIAVTSASCSVESDDCDVIISVYALDLRLANDSTGACIQELSLSGTVLDCSDDNNFK INEIYQSSNNYMTVNLSSTATNDGYFWIGFNTSSSSSDILTLRCPAQSQQTVCTTTTTEPTTVTTDITTEKATDNSTDNT TEETTTEMTNTTMQSPLPAHEGRASSISWGVVIAVVVIILVVIVGVVVIVVYCIKKGKEDGQGQGHRFQMDADKSSTEND SDSFPQDKAPVITNSNPPTTTRLNTPSQQKNGITTPLIESNLPPLNQTNIKMDVEDTESRLSTDVPLAKEREKDSLTNLR TMNPIGLEIDMPQASGSQLPFESTEKQKKKKKKKKKRKTIDREENKPVDDELKEPQEVPPGDEAEAPLPDSSEVINEERK KKKRKKKRTEVSDENDNIDVTGDGQDNREKRKKKKKKKKLEKIDERTMDDFIKDHEENKPFHNQVAPV |
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