Gene
| Gene Model ID | pfu_aug1.0_5004.1_52420 |
|---|---|
| Locus | scaffold5004.1 : 2858 ... 10905 : - |
| To GenomeBrowser | scaffold5004.1:2858..10905 |
| Genes list of scaffold | scaffold5004.1 |
| Synonym | pfu_aug2.0_756.1_21118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5004.1_52420.t1 | 2 | 1 | Na_sulph_symp | 1 | 40 | 2.3e-28 | 99.2 | 3.9e-07 | 0.0014 | 17.5 |
| pfu_aug1.0_5004.1_52420.t1 | 2 | 2 | Na_sulph_symp | 38 | 222 | 2.3e-28 | 99.2 | 1.4e-27 | 5.3e-24 | 84.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5004.1_52420.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5004.1_52420.t1 atgttgtttatgggaggtttgattgttgccgtagctttggaagaagtgaatctacacaaacgcattgctgtaggtgttac catgctccttgggtccagaatgaatactcagtttttgaagttcagtaacaatacagttgatgctggcttgacgtacgcaa aatggatggcttttggtgtgcctgtgtccttcttactgcttgttctatgttggatctggctgcaaatattcttcctgaga acagaaatctgcaaaagaacagaggaaaccaagaagcaagccgtacaagcagcaatacgaaaagaatgggataaactagg aaaagtcacatttgccgaggtggcagtgttggtctcgttttctacactggctttattgtggatatttagagacttaccca atgtcggtggatgggggatggtttttacagatgctgaaactggaaaaaagacagcgtctgattctaccgcagccatgttg atcagcgtcctcctgtttatcataccacgagaaatccctaatgtcctctgctgtggaacagtagatgacaatggcgagcc tatcaaacccacgtacaaaccaatattaacatggcatgctgtagagaagaaggtggcttggggtgttatcttccttcttg ggggaggttttgctctggcttctgcttgcacagtaagatactag |
|
Protein
| Protein ID | pfu_aug1.0_5004.1_52420.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5004.1_52420.t1 MLFMGGLIVAVALEEVNLHKRIAVGVTMLLGSRMNTQFLKFSNNTVDAGLTYAKWMAFGVPVSFLLLVLCWIWLQIFFLR TEICKRTEETKKQAVQAAIRKEWDKLGKVTFAEVAVLVSFSTLALLWIFRDLPNVGGWGMVFTDAETGKKTASDSTAAML ISVLLFIIPREIPNVLCCGTVDDNGEPIKPTYKPILTWHAVEKKVAWGVIFLLGGGFALASACTVRY |
|