Gene
| Gene Model ID | pfu_aug1.0_501.1_50903 |
|---|---|
| Locus | scaffold501.1 : 45578 ... 54165 : - |
| To GenomeBrowser | scaffold501.1:45578..54165 |
| Genes list of scaffold | scaffold501.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_501.1_50903.t2 | 1 | 1 | 7tm_1 | 38 | 410 | 3.9e-25 | 88.4 | 1.7e-28 | 6.1e-25 | 87.8 |
Transcript
| Transcript ID | pfu_aug1.0_501.1_50903.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_501.1_50903.t1 atgatgccgatcacgtcatctgtgacattacagttctggaaccagtattattcacaccgtttcataccaatgtcaatatt tctcgtgacgcttataatttttggaatattgggaaacgtcatagtagtgattgtgtacattttacgccctagacttcgca cctatggtcgatattttatcccttacttcgctgttttggatttattgtccatcgtatttagtggtagtctaggcttaatt aagtgtttcagatatgtaatctttcccggtgacgcaatctgcaaactattgacttattcaacgtatacatccgttttcgc atcattattgttacttctgttcatttctgtccagaggtacgttaaaatttgccgtccttttggccgccagttttcgaagt ttgaatgccgtttgtttttaatactttcaattattttgcctggagtctcgtttataccattaactgtagtaactggaaca tttcatgttacaaacgaaaagcttgcacttatagaaacgcgatgtggtatcgtcccaaagtatgttgcaggaactacggc ctatcgcaaaataggtgcaatgatacctctccttgaaatatgtataatgactgtcatttactacaaaatatggcgtcata tgcctactcaaaaacaaacgagaacgaagaatgactccgatacagaaccgaaacgtaaaaatagaagcggaactgaactc acaaggtgtgtcttatcgacatacgaccacgccagtgatagagttaaagataaggaagatcatagaatttctatggagaa taatgaagtaaatgatggaaaaatttcgtcagaagatgttgttaaaggggaagtaaccatgtttcatagtcagatgagtc aagcagcatgcttttctaagattaatgccaaacacgagagaaatgaaatgcaaatgattccaggagatgaaagagaagag cacgaagctgtctcgaatgatgagacgcattttgaaaatcgaaatgtaaaaagatgttactatggcaggagtacattgag ccgaactacaaccgttttcataattatctccgtactcggttttctatcatatatgccttcagcagttatcggcaccatgg aaacagaaaactatttgttcttcgatcaactttcacagcaaatgtttgttacttgttcccttttaagggtattttaccta ttcaaccatgcagccaatcctcttatttacgggatctttgataccaaattcaggaacgaaatgaagctttaa |
|
| Transcript ID | pfu_aug1.0_501.1_50903.t2 |
| Definition | - |
>pfu_aug1.0_501.1_50903.t2 atgatgccgatcacgtcatctgtgacattacagttctggaaccagtattattcacaccgtttcataccaatgtcaatatt tctcgtgacgcttataatttttggaatattgggaaacgtcatagtagtgattgtgtacattttacgccctagacttcgca cctatggtcgatattttatcccttacttcgctgttttggatttattgtccatcgtatttagtggtagtctaggcttaatt aagtgtttcagatatgtaatctttcccggtgacgcaatctgcaaactattgacttattcaacgtatacatccgttttcgc atcattattgttacttctgttcatttctgtccagaggtacgttaaaatttgccgtccttttggccgccagttttcgaagt ttgaatgccgtttgtttttaatactttcaattattttgcctggagtctcgtttataccattaactgtagtaactggaaca tttcatgttacaaacgaaaagcttgcacttatagaaacgcgatgtggtatcgtcccaaagtatgttgcaggaactacggc ctatcgcaaaataggtgcaatgatacctctccttgaaatatgtataatgactgtcatttactacaaaatatggcgtcata tgcctactcaaaaacaaacgagaacgaagaatgactccgatacagaaccgaaacgtaaaaatagaagcggaactgaactc acaaggtgtgtcttatcgacatacgaccacgccagtgatagagttaaagataaggaagatcatagaatttctatggagaa taatgaagtaaatgatggaaaaatttcgtcagaagatgttgttaaaggggaagtaaccatgtttcatagtcagatgagtc aagcagcatgcttttctaagattaatgccaaacacgagagaaatgaaatgcaaatgattccaggagatgaaagagaagag cacgaagctgtctcgaatgatgagacgcattttgaaaatcgaaatgtaaaaagatgttactatggcaggagtacattgag ccgaactacaaccgttttcataattatctccgtactcggttttctatcatatatgccttcagcagttatcggcaccatgg aaacagaaaactatttgttcttcgatcaactttcacagcaaatgtttgttacttgttcccttttaagggtattttaccta ttcaaccatgcagccaatcctcttatttacgggatctttgataccaaattcaggaacgaaatgaagctttaa |
|
Protein
| Protein ID | pfu_aug1.0_501.1_50903.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_501.1_50903.t1 MMPITSSVTLQFWNQYYSHRFIPMSIFLVTLIIFGILGNVIVVIVYILRPRLRTYGRYFIPYFAVLDLLSIVFSGSLGLI KCFRYVIFPGDAICKLLTYSTYTSVFASLLLLLFISVQRYVKICRPFGRQFSKFECRLFLILSIILPGVSFIPLTVVTGT FHVTNEKLALIETRCGIVPKYVAGTTAYRKIGAMIPLLEICIMTVIYYKIWRHMPTQKQTRTKNDSDTEPKRKNRSGTEL TRCVLSTYDHASDRVKDKEDHRISMENNEVNDGKISSEDVVKGEVTMFHSQMSQAACFSKINAKHERNEMQMIPGDEREE HEAVSNDETHFENRNVKRCYYGRSTLSRTTTVFIIISVLGFLSYMPSAVIGTMETENYLFFDQLSQQMFVTCSLLRVFYL FNHAANPLIYGIFDTKFRNEMKL |
|
| Protein ID | pfu_aug1.0_501.1_50903.t2 |
| Definition | - |
>pfu_aug1.0_501.1_50903.t2 MMPITSSVTLQFWNQYYSHRFIPMSIFLVTLIIFGILGNVIVVIVYILRPRLRTYGRYFIPYFAVLDLLSIVFSGSLGLI KCFRYVIFPGDAICKLLTYSTYTSVFASLLLLLFISVQRYVKICRPFGRQFSKFECRLFLILSIILPGVSFIPLTVVTGT FHVTNEKLALIETRCGIVPKYVAGTTAYRKIGAMIPLLEICIMTVIYYKIWRHMPTQKQTRTKNDSDTEPKRKNRSGTEL TRCVLSTYDHASDRVKDKEDHRISMENNEVNDGKISSEDVVKGEVTMFHSQMSQAACFSKINAKHERNEMQMIPGDEREE HEAVSNDETHFENRNVKRCYYGRSTLSRTTTVFIIISVLGFLSYMPSAVIGTMETENYLFFDQLSQQMFVTCSLLRVFYL FNHAANPLIYGIFDTKFRNEMKL |
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