Gene
Gene Model ID | pfu_aug1.0_501.1_50912 |
---|---|
Locus | scaffold501.1 : 194531 ... 199015 : - |
To GenomeBrowser | scaffold501.1:194531..199015 |
Genes list of scaffold | scaffold501.1 |
Synonym | pfu_aug2.0_11.1_03382 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_501.1_50912.t1 | 2 | 1 | Fasciclin | 29 | 148 | 0.0 | 232.4 | 1.3e-37 | 1.0e-33 | 116.0 |
pfu_aug1.0_501.1_50912.t1 | 2 | 2 | Fasciclin | 161 | 283 | 0.0 | 232.4 | 2.3e-38 | 1.7e-34 | 118.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_501.1_50912.t1 |
---|---|
Definition | - |
>pfu_aug1.0_501.1_50912.t1 atgtttaaagttcttgttgcaagtcttcttttccacagcgccctctctgggagtttggtggacgtactcaaaggagacgg ggagacagacctggtcgattttataaaacaggccggacttgccgacgccttggctggaggtccattcactgtttttgcgc ccaccaacgccgctttcagtaagcttccacaagccaccctgaacactctgaataccgacttcaacgctttagcgaacatt ctcaaatgtcacgtggtacaaggcaacatccataaggctgatgctaaaaatgaactcactctcactacgctggctggaac aaaaatcagatttaatatttacccccataataatgttgttactgtagaagggtcaaagatcaccagctttgatctgaatg ctgacaatggagttgtccacgtgatcgatactgtaatgacgccacctagcggcagtattgtagatattgtggcgggaaac agcgacttcagcgaacttctcaaacttgtcaaagaaactggtcttgtcagtgctcttcaaggtgatggattaacagtctt tgcaccaacgaatgctgcctttcaaagacttggaagccatgtgttgggcaatctggccaaaaacccagctcttctgaaag aaattttggaataccatgttgtaccccatacagaatactcaaacggtttatacaacagggaatacctcagaactctggac aagcaccacgatgtagtcaagctccatatttctagttccggtgtaatggtgaacaatgctcacgtgactcaagctgatat aagcgcaaccaacggagttgtacatgtcatcgatcacgtgctctttcccaccagacatttattttccattttaggataa |
Protein
Protein ID | pfu_aug1.0_501.1_50912.t1 |
---|---|
Definition | - |
>pfu_aug1.0_501.1_50912.t1 MFKVLVASLLFHSALSGSLVDVLKGDGETDLVDFIKQAGLADALAGGPFTVFAPTNAAFSKLPQATLNTLNTDFNALANI LKCHVVQGNIHKADAKNELTLTTLAGTKIRFNIYPHNNVVTVEGSKITSFDLNADNGVVHVIDTVMTPPSGSIVDIVAGN SDFSELLKLVKETGLVSALQGDGLTVFAPTNAAFQRLGSHVLGNLAKNPALLKEILEYHVVPHTEYSNGLYNREYLRTLD KHHDVVKLHISSSGVMVNNAHVTQADISATNGVVHVIDHVLFPTRHLFSILG |