Gene
| Gene Model ID | pfu_aug1.0_501.1_50912 |
|---|---|
| Locus | scaffold501.1 : 194531 ... 199015 : - |
| To GenomeBrowser | scaffold501.1:194531..199015 |
| Genes list of scaffold | scaffold501.1 |
| Synonym | pfu_aug2.0_11.1_03382 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_501.1_50912.t1 | 2 | 1 | Fasciclin | 29 | 148 | 0.0 | 232.4 | 1.3e-37 | 1.0e-33 | 116.0 |
| pfu_aug1.0_501.1_50912.t1 | 2 | 2 | Fasciclin | 161 | 283 | 0.0 | 232.4 | 2.3e-38 | 1.7e-34 | 118.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_501.1_50912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_501.1_50912.t1 atgtttaaagttcttgttgcaagtcttcttttccacagcgccctctctgggagtttggtggacgtactcaaaggagacgg ggagacagacctggtcgattttataaaacaggccggacttgccgacgccttggctggaggtccattcactgtttttgcgc ccaccaacgccgctttcagtaagcttccacaagccaccctgaacactctgaataccgacttcaacgctttagcgaacatt ctcaaatgtcacgtggtacaaggcaacatccataaggctgatgctaaaaatgaactcactctcactacgctggctggaac aaaaatcagatttaatatttacccccataataatgttgttactgtagaagggtcaaagatcaccagctttgatctgaatg ctgacaatggagttgtccacgtgatcgatactgtaatgacgccacctagcggcagtattgtagatattgtggcgggaaac agcgacttcagcgaacttctcaaacttgtcaaagaaactggtcttgtcagtgctcttcaaggtgatggattaacagtctt tgcaccaacgaatgctgcctttcaaagacttggaagccatgtgttgggcaatctggccaaaaacccagctcttctgaaag aaattttggaataccatgttgtaccccatacagaatactcaaacggtttatacaacagggaatacctcagaactctggac aagcaccacgatgtagtcaagctccatatttctagttccggtgtaatggtgaacaatgctcacgtgactcaagctgatat aagcgcaaccaacggagttgtacatgtcatcgatcacgtgctctttcccaccagacatttattttccattttaggataa |
|
Protein
| Protein ID | pfu_aug1.0_501.1_50912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_501.1_50912.t1 MFKVLVASLLFHSALSGSLVDVLKGDGETDLVDFIKQAGLADALAGGPFTVFAPTNAAFSKLPQATLNTLNTDFNALANI LKCHVVQGNIHKADAKNELTLTTLAGTKIRFNIYPHNNVVTVEGSKITSFDLNADNGVVHVIDTVMTPPSGSIVDIVAGN SDFSELLKLVKETGLVSALQGDGLTVFAPTNAAFQRLGSHVLGNLAKNPALLKEILEYHVVPHTEYSNGLYNREYLRTLD KHHDVVKLHISSSGVMVNNAHVTQADISATNGVVHVIDHVLFPTRHLFSILG |
|