Gene
Gene Model ID | pfu_aug1.0_501.1_50913 |
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Locus | scaffold501.1 : 203680 ... 211025 : - |
To GenomeBrowser | scaffold501.1:203680..211025 |
Genes list of scaffold | scaffold501.1 |
Synonym | pfu_aug2.0_11.1_03381 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_501.1_50913.t1 | 2 | 1 | Fasciclin | 25 | 144 | 0.0 | 231.7 | 2.5e-39 | 1.9e-35 | 121.6 |
pfu_aug1.0_501.1_50913.t1 | 2 | 2 | Fasciclin | 157 | 279 | 0.0 | 231.7 | 1.3e-36 | 9.8e-33 | 112.8 |
Transcript
Transcript ID | pfu_aug1.0_501.1_50913.t1 |
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Definition | - |
>pfu_aug1.0_501.1_50913.t1 atgtccgtgttacgtattataccgtgcgccctctgtgggagtttggtggatgttctccaaaacgacggggagactagtct gatatccttaataaagcaggccggacttgccgacgccttggccggaggtccattcaccgttttcgcaccaacgaatgctg ctttcagtaagctacctcaagccacactgaacgctctgaatgccgactctacagccttagcgaacattctcaagtatcac gtggtccaaggacgcatccataaggcagatgctaaaaatgaactcacacttacaacgctggccggaacaaaaatcagatt taatatctattctcataataatgttgtcactgtagaggggtcaaagatcaccaactttgacctgaatgctgacaatggag ttgtccacgtgatcgatactgtaatgacgccaccaagcggcagtattgtagatattgtggcgggaaatagcgacttcagc gaacttctcaaacttgtaaaggaaactggtcttgtcagtgctctacaaggtgatggattaacagtatttgcaccaaccaa tgctgcatttcagaaacttggacatcgtgttttaggcaatctggccaaaaaccaagctcttctaaaagaaattttggaat accacgtcgtacctcatacagaatactctaaaggtttatataacagggaatttctcagaaccctagacaaacatcatgat gtaatcagacttcatacttcaagttccggtgtgatggtgaataatgctcacgtgacccaagctgatataagtgccactaa cggagttgtacacgtcatcgatcacgcgattgttccacctagatatttactttccacaattataggaaagaaatag |
Protein
Protein ID | pfu_aug1.0_501.1_50913.t1 |
---|---|
Definition | - |
>pfu_aug1.0_501.1_50913.t1 MSVLRIIPCALCGSLVDVLQNDGETSLISLIKQAGLADALAGGPFTVFAPTNAAFSKLPQATLNALNADSTALANILKYH VVQGRIHKADAKNELTLTTLAGTKIRFNIYSHNNVVTVEGSKITNFDLNADNGVVHVIDTVMTPPSGSIVDIVAGNSDFS ELLKLVKETGLVSALQGDGLTVFAPTNAAFQKLGHRVLGNLAKNQALLKEILEYHVVPHTEYSKGLYNREFLRTLDKHHD VIRLHTSSSGVMVNNAHVTQADISATNGVVHVIDHAIVPPRYLLSTIIGKK |