Gene
Gene Model ID | pfu_aug1.0_501.1_50916 |
---|---|
Locus | scaffold501.1 : 221476 ... 233625 : + |
To GenomeBrowser | scaffold501.1:221476..233625 |
Genes list of scaffold | scaffold501.1 |
Synonym | pfu_aug2.0_11.1_03378 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_501.1_50916.t1 | 1 | 1 | PLAC8 | 5 | 97 | 1.3e-24 | 86.7 | 1.0e-28 | 1.5e-24 | 86.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_501.1_50916.t1 | gi|156409347|ref|XP_001642131.1| | predicted protein [Nematostella vectensis] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 1 |
maleGonad | 3 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_501.1_50916.t1 |
---|---|
Definition | - |
>pfu_aug1.0_501.1_50916.t1 atggcaggtgaatggcagcacggactttttggatgctttgacaattgcactatttgcatcatttcctacttcttgccatg ctaccagttcggaaaaaatgccgaagcggtgggtgaaagctgtttcatgtgcggccttgccttcttagtgccactagtgg atttgtacgccatcatcaaaatccgaggaaaaattcgggagacgaagggaattgagggcggccttgtaggcgacctgctc acatggtgcttctgtccgctatgtgcgttggttcaagaagctcaagaagtccagggtatggggccagccggtatcgcaat ggacagagaatga |
Protein
Protein ID | pfu_aug1.0_501.1_50916.t1 |
---|---|
Definition | - |
>pfu_aug1.0_501.1_50916.t1 MAGEWQHGLFGCFDNCTICIISYFLPCYQFGKNAEAVGESCFMCGLAFLVPLVDLYAIIKIRGKIRETKGIEGGLVGDLL TWCFCPLCALVQEAQEVQGMGPAGIAMDRE |