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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_50101.1_34466
Locus scaffold50101.1 : 57 ... 1614 : +
To GenomeBrowser scaffold50101.1:57..1614
Genes list of scaffold scaffold50101.1
Synonym pfu_aug2.0_603.1_10975

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_50101.1_34466.t1 1 1 AMP-binding 50 318 1.90016e-42 145.1 0.0 2.40042e-42 144.8

Transcript
Transcript IDpfu_aug1.0_50101.1_34466.t1
Definition-
>pfu_aug1.0_50101.1_34466.t1
atggaattgcatgatccaatactccaactccttgaaaccttaaaagaaaagaatcctaaggtaccaccagtttcaaacga
tggagacagcgaccccttaatagttttgcttcgtgctatggacggtgcctctaactaccctactctacagacggcactag
aaagtgaggaacctgaggtgaggtttccaactctcttttctgaagatgtcatagctgtgttcacaacatctggaagtaca
gggaaaccgaaaatggttcctcacacacatttcagtttcgccaacattccaatacctgacgacttggggttcaaggatag
cactttttacaatgacagaccgtttgcctggcttggaggatcaccatttacgacaattatgttgggtgaaacaagaatat
tcacagacgcctcggttacaatcggtggagaacatactgataagatatggaatatcatcaaaacagagaagtgtgaaagc
gccttacttatgccttatttcattggtgacctactaagtaagaaagatgaatacaaagacccgttcaaactcaagtttgt
actgaccggcggccagatgcttgaaagcttttacacacaaacacttggaatttttgccgaatcgatggttgttgcgtacg
catcaacagaaagtgttactgtttcagtcggaaagctgcttaaagagggtgaccaaatggaatctggttacattggtaca
ttgggacttggattagaaatgaagttgatagatgaggatggtcatgttactgctctaggagaagagggggagatatgcgt
aaggagtccaattctattcaatggatacatcaataatgacgaggcaacaaatgcagcatttcttcctggaaactggttca
ggtctggagatcttggcataatcaaagacgatggttcaataataataaaagggagagtaaaaaatatcgtttccagaggg
actcgtaaaattatgccagatgcagttgaagatattattttgaaaatggacggtattctacgcgctgccgttgttgccgt
tccagacaagaggctttacgaggaagtctgcgcgtgcttcgttgtgaaaggaggattctcaatttcggagaaagatgtcg
aaacctattgctcggagagaatgttgaagaaacagacattagatgggttaggggacattcctacatattatcttaaattt
gagtcttttcctcgcttgctgactggaaagatagacaaaataagcatcaaaggaacagcaatcgaaagactgaatttaaa
taagtag

Protein
Protein IDpfu_aug1.0_50101.1_34466.t1
Definition-
>pfu_aug1.0_50101.1_34466.t1
MELHDPILQLLETLKEKNPKVPPVSNDGDSDPLIVLLRAMDGASNYPTLQTALESEEPEVRFPTLFSEDVIAVFTTSGST
GKPKMVPHTHFSFANIPIPDDLGFKDSTFYNDRPFAWLGGSPFTTIMLGETRIFTDASVTIGGEHTDKIWNIIKTEKCES
ALLMPYFIGDLLSKKDEYKDPFKLKFVLTGGQMLESFYTQTLGIFAESMVVAYASTESVTVSVGKLLKEGDQMESGYIGT
LGLGLEMKLIDEDGHVTALGEEGEICVRSPILFNGYINNDEATNAAFLPGNWFRSGDLGIIKDDGSIIIKGRVKNIVSRG
TRKIMPDAVEDIILKMDGILRAAVVAVPDKRLYEEVCACFVVKGGFSISEKDVETYCSERMLKKQTLDGLGDIPTYYLKF
ESFPRLLTGKIDKISIKGTAIERLNLNK

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