Gene
| Gene Model ID | pfu_aug1.0_50180.1_05453 |
|---|---|
| Locus | scaffold50180.1 : 1195 ... 4330 : - |
| To GenomeBrowser | scaffold50180.1:1195..4330 |
| Genes list of scaffold | scaffold50180.1 |
| Synonym | pfu_aug2.0_1735.1_18497 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_50180.1_05453.t1 | 1 | 1 | Neur_chan_LBD | 3 | 135 | 3.7e-27 | 94.8 | 7.7e-31 | 5.7e-27 | 94.2 |
| pfu_aug1.0_50180.1_05453.t1 | 1 | 1 | Neur_chan_memb | 142 | 308 | 3.1e-14 | 53.4 | 6.3e-17 | 4.6e-13 | 49.5 |
Transcript
| Transcript ID | pfu_aug1.0_50180.1_05453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_50180.1_05453.t1 gtgacggaagcagaagtatggacgcctgaattcttcgtggacaattcaatggccgatgtctcaatcctgtctgatgaaaa tgttttattggaggtgaaaagcacaggagaggtagaatggtccctccccagaatcttcacagtccactgtgatatagatg tgacgtattatccgtttgatacacaaacatgcgcagtagaacttaccagctgggcttacgctaaaccggaaatgcagatt gcagctctgagaacaaatgtaaatttggaggatcttaagcaagatggagagtgggacattacatcatccagggtagaaat cagtgatataccagagacaaaaactgatggttcagttgtctacctttcaagaattaattttcatataaccctacggagga agttttcatattacgtcacttcccttttgcttccagtgttgttaatatcatatctcaactcgcttgtcttcattcttcca gttcaatctggcgaaaagattggatgtacgttgacaattttattggcattggccgtgttattgacgctgatcactgacag cattccgtctacttccttaaacatatgtatattatcaacctatttggcaaccgtgttgtgtatcggtgttttatgttgct tgttgactgtgatcataatacgaatctaccatcttccacaaaccagagaaagatcgtcatccctgttatccttcataaac aaagtagtgataccgttgtcatgctggaacggatgttgcaaaggaaaaacatgtcgcaaaaataaagaaaacaccgtgga accttcgcaaaaccacaaaaaggaagcccactacaagaattttcaaaccagtccaaagcaccctttcaaaggaaatgaaa aggatgtggagaaccatccgtccaaagacaatgatggaacagaggaaatcccagagatggagaaagattacacctggaac gaaatagcgtgcatgttggactggtttttcttcgtgacaaccatcgtggtcaccactgtaatgacgattgttttcttcat ggctttggccttgggaggatctgtaaatacgtag |
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Protein
| Protein ID | pfu_aug1.0_50180.1_05453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_50180.1_05453.t1 VTEAEVWTPEFFVDNSMADVSILSDENVLLEVKSTGEVEWSLPRIFTVHCDIDVTYYPFDTQTCAVELTSWAYAKPEMQI AALRTNVNLEDLKQDGEWDITSSRVEISDIPETKTDGSVVYLSRINFHITLRRKFSYYVTSLLLPVLLISYLNSLVFILP VQSGEKIGCTLTILLALAVLLTLITDSIPSTSLNICILSTYLATVLCIGVLCCLLTVIIIRIYHLPQTRERSSSLLSFIN KVVIPLSCWNGCCKGKTCRKNKENTVEPSQNHKKEAHYKNFQTSPKHPFKGNEKDVENHPSKDNDGTEEIPEMEKDYTWN EIACMLDWFFFVTTIVVTTVMTIVFFMALALGGSVNT |
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