Gene
| Gene Model ID | pfu_aug1.0_5020.1_67134 |
|---|---|
| Locus | scaffold5020.1 : 1 ... 16003 : + |
| To GenomeBrowser | scaffold5020.1:1..16003 |
| Genes list of scaffold | scaffold5020.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5020.1_67134.t1 | 1 | 1 | PH_BEACH | 139 | 251 | 1.8e-15 | 56.6 | 1.1e-18 | 3.9e-15 | 55.5 |
| pfu_aug1.0_5020.1_67134.t1 | 1 | 1 | Beach | 265 | 437 | 0.0 | 232.6 | 0.0 | 0.0 | 231.2 |
| pfu_aug1.0_5020.1_67134.t1 | 2 | 1 | FYVE | 549 | 568 | 5.4e-12 | 45.4 | 0.059 | 220.0 | 1.8 |
| pfu_aug1.0_5020.1_67134.t1 | 2 | 2 | FYVE | 637 | 673 | 5.4e-12 | 45.4 | 6.3e-15 | 2.3e-11 | 43.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5020.1_67134.t1 | gi|224049327|ref|XP_002186555.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5020.1_67134.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5020.1_67134.t1 catttaattgtgaaatctgtctttcagcctttgaagtacaagatagcgatgagttatgacagtaaggagtattttgagag gttccgttcacagactttagtaggggtggggctggaggatctacctatacagagaggagtagaagactcgcctgacggca acgagaacggagacgacagatcacctgatgatattacaaggatgtccaagctacttcatcgaccaagtaagaccaagtct acagacctggatgatgataatgacgaggggccaactacagacaatgctggtgatgtagacaagggggaatcacagataga cggacagggggaggggcaaactaataataaaacagacaataatcaggcaatactcaggatccttggagagggtgaaaaga taacaaacatatttcggtgtgcgaggatccagggtttagacacagccgagggactcctgctgtttgggagggagtatttc tacgtcatagatggctttacaatgctgagaaccagggagatcagagatatagacagtttaccttctgacttacatgaccc aatcatcccaaagacatcaaaaggttcaggctctcagaaacgaatgtgcagcaagtttgcatatgaggacataagagagg ttcataaacgtcgttatttactacaaccaatagccgtggaagttttctcctctgacggacagaattatctactggcgttc ccaaggaagctacgcaataaagtgtatgctaaatctggattgataagtactctgattggagagaaatctgtcacccagag atgggagagaggagagatcaataatttccagtatttgatgcatctgaacacactggctggtagatcatacaatgacctaa tgcagtaccctgttttcccatggatcctagcagactatgattctgaggagcttgacctgtataatgaggcgaccttcaga gatttgtccaaaccaatgggagctcagacacctgacagacttaaacaattcaagaagaggtatcacgactgggatgaccc ccagggcgagactccaccgtaccattacggaacacattactcgtcagctatgatagtagcttcatatctagtcagaatgg aaccattcacacaacacttccttaaactacagggaggacactttgatttagcagacagaatgttccacagtgtgaaggag aactggctgtctgcatccaagaacaacatggccgacgtcaaggaacttatcccagaattcttctacctcccagaattcct gtgcaatagcaataactatgatttaggaaatgtagatatttatntttttcagttgttcaagaagccccaccctcagaaga ggttgaatatcaggttaaatgaatctctccccatgggtacattacctggacaggataaactgttcttccataatgtggac aacatgaagccaacaaagcaagctatcaaagaattaaaaggtgctgtaggacagataattcacacagaacgttatgtact ggctgtggagcagaataaagtattaataccacccacctataacaaatacctggcatgggggtttgctgacctcagtgtta gaattggaaattatgagtcagataaggccactcaggtgtttgagtgtttagacaatggtgaaatcctctgtgcttcatgt cccaacgccaaaatcttcatcaccgggggattcaagtggcagagacagttggtatttcgtagcaaactgactatgcacac agcttatgaacgtaaggacaatcgtgatccagcttccgtaacttctcttgccgtatcaaaagatcatcgtactgtgtatg ttggtgacagtaaaggtcgtatatacagctggacagtgactgaccagccagggagagtagtagctgaccactggatgaag gacgagggagccgacagctgtctggcttgtggggtcaagttctcattctccgagaggaaacatcactgcagaaactgtgg acagctattgtgttctaagtaa |
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Protein
| Protein ID | pfu_aug1.0_5020.1_67134.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5020.1_67134.t1 HLIVKSVFQPLKYKIAMSYDSKEYFERFRSQTLVGVGLEDLPIQRGVEDSPDGNENGDDRSPDDITRMSKLLHRPSKTKS TDLDDDNDEGPTTDNAGDVDKGESQIDGQGEGQTNNKTDNNQAILRILGEGEKITNIFRCARIQGLDTAEGLLLFGREYF YVIDGFTMLRTREIRDIDSLPSDLHDPIIPKTSKGSGSQKRMCSKFAYEDIREVHKRRYLLQPIAVEVFSSDGQNYLLAF PRKLRNKVYAKSGLISTLIGEKSVTQRWERGEINNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEELDLYNEATFR DLSKPMGAQTPDRLKQFKKRYHDWDDPQGETPPYHYGTHYSSAMIVASYLVRMEPFTQHFLKLQGGHFDLADRMFHSVKE NWLSASKNNMADVKELIPEFFYLPEFLCNSNNYDLGNVDIYXFQLFKKPHPQKRLNIRLNESLPMGTLPGQDKLFFHNVD NMKPTKQAIKELKGAVGQIIHTERYVLAVEQNKVLIPPTYNKYLAWGFADLSVRIGNYESDKATQVFECLDNGEILCASC PNAKIFITGGFKWQRQLVFRSKLTMHTAYERKDNRDPASVTSLAVSKDHRTVYVGDSKGRIYSWTVTDQPGRVVADHWMK DEGADSCLACGVKFSFSERKHHCRNCGQLLCSK |
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