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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5029.1_59683
Locus scaffold5029.1 : 20664 ... 23885 : -
To GenomeBrowser scaffold5029.1:20664..23885
Genes list of scaffold scaffold5029.1
Synonym pfu_aug2.0_759.1_31141

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5029.1_59683.t1 gi|325296751|ref|NP_001191611.1| PTSP-like peptide neurotransmitter precursor [Aplysia californica] 9.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_5029.1_59683.t1
Definition-
>pfu_aug1.0_5029.1_59683.t1
atgaagtgcctgatacattgcgctatcgtaataacgactttaacattctccctttgtgaaatctacgatgaacataaaga
ggctgacgaattagataatatatctcccaatcttcaaaaagacttacatctgaaaagttcactatctgattctaggacag
cagataagcgtgcttggcaaacgtcttcttggggtaaaaggaaatggccaggaacgaacgtttgggggaaacgaaaatgg
atgaacgtgtggggaaaacgaaaatgggcttctatggggacctggggaaaacggtctgatccattaattgataacggact
agaaaacattcacaaaagggatacagaacacagctttcctttgaaacgaaaatggaatcagtttgtaacatggggcaaac
gttccatgccaatacagagaaaatgggcatctgtttcattatggggtaaacgaagtcaagataattataacgagccggag
aagcgcaaatggtcagcgctgacgtcatggggaaaacgagatgatgtaggggatattaactcggacaaaaacaaaaggaa
atgggccatgtctgcttggggtaaaaggacaaatcccatcgatggtgacaacgacatgaacaagaaatgggccttggcat
catggggaaagagaaatgatatttataatacaccaagtctacaagataacgatgcgaaatctgataatacagtggacaaa
cgtaaatggtcaaatttttcatcttggggaaaacgtatgagtatacaaaactggcgtaagcgaccttggctttgggcgaa
aaggaggcgaggatggagtgccatgtcatcttggggcaaacgatcatctttagacacgaaagaaaatgatgatcgtcagc
tgctctcagtataa

Protein
Protein IDpfu_aug1.0_5029.1_59683.t1
Definition-
>pfu_aug1.0_5029.1_59683.t1
MKCLIHCAIVITTLTFSLCEIYDEHKEADELDNISPNLQKDLHLKSSLSDSRTADKRAWQTSSWGKRKWPGTNVWGKRKW
MNVWGKRKWASMGTWGKRSDPLIDNGLENIHKRDTEHSFPLKRKWNQFVTWGKRSMPIQRKWASVSLWGKRSQDNYNEPE
KRKWSALTSWGKRDDVGDINSDKNKRKWAMSAWGKRTNPIDGDNDMNKKWALASWGKRNDIYNTPSLQDNDAKSDNTVDK
RKWSNFSSWGKRMSIQNWRKRPWLWAKRRRGWSAMSSWGKRSSLDTKENDDRQLLSV

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