Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5030.1_30849
Locus scaffold5030.1 : 42116 ... 43925 : -
To GenomeBrowser scaffold5030.1:42116..43925
Genes list of scaffold scaffold5030.1
Synonym pfu_aug2.0_2114.1_15413

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5030.1_30849.t1 1 1 zf-B_box 14 46 1.0e-05 25.3 1.5e-08 1.5e-05 24.8

Transcript
Transcript IDpfu_aug1.0_5030.1_30849.t1
Definition-
>pfu_aug1.0_5030.1_30849.t1
atgaaggattcggaatctgaagggctgctgtatggtgctgaagtattttgtgaggaacatagaagcgaaagtgtacgctt
ttattgcgccgaccataagagggtttgttgcatgacgtgtatgatgttacgtcatcgtaaatgtgatgacgttgggtccg
tcgaagatggagcaaaggccatgaagacttttaaagaggtcaaagaattaaaaacagatttgaaaggcttgaaaatacaa
tttgaggaacttgtgaagaacagggaagaaaacattcagagcttcacagcccctcttgcacagaccgaagacaacattga
gacgtcattgaatgaattgataaaccatttcaaaaccacgaaaaccgaaatcctagaggaacttggagcaaagaaaaaag
aaattattccacatacaggacgaaaaatcagagcttga

Protein
Protein IDpfu_aug1.0_5030.1_30849.t1
Definition-
>pfu_aug1.0_5030.1_30849.t1
MKDSESEGLLYGAEVFCEEHRSESVRFYCADHKRVCCMTCMMLRHRKCDDVGSVEDGAKAMKTFKEVKELKTDLKGLKIQ
FEELVKNREENIQSFTAPLAQTEDNIETSLNELINHFKTTKTEILEELGAKKKEIIPHTGRKIRA

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