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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5035.1_23717
Locus scaffold5035.1 : 32309 ... 38625 : -
To GenomeBrowser scaffold5035.1:32309..38625
Genes list of scaffold scaffold5035.1
Synonym pfu_aug2.0_1088.1_28047

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5035.1_23717.t1 1 1 OTU 171 291 8.9e-16 58.5 2.0e-19 1.5e-15 57.8

Transcript
Transcript IDpfu_aug1.0_5035.1_23717.t1
Definition-
>pfu_aug1.0_5035.1_23717.t1
atgtttcaaacgacgtatcaagatcactttaaccgaaaatctacgcaaaaacaaagaggatatgaaccgggtggccgtgc
caaatacgacaccaatgggtcgagtgatagcgtttcgtcgttaaaacgtcgtgagaaaggacgaacggtttcccaggaaa
gaacaattgaggaaccaataccggtgacagaagaagaggagatagaggacatgtctggcagaaaaactgtgagaagtaaa
ggaaagccattaccaaaaccatcaccaaaaactgaagttaagcatcgtgcaaataaagatggtaaagatgctgttgtcaa
ggactcagggaaaccagaaacggaagtatccgtagaggatctcggtccgccatcagtattctaccccgtcacgcctggat
ggcagatgacgaacgcaaagaaacttggcgttcgtattcaaagaacattaaattttggaactcaaaagcgattttatgct
acaactccaccacgcatgacagaaccggtcaggggcgacggaaactgcttcttccgggctatatgctccctcatcacggg
ttctgaatccgaccacatggatgtacgcaaggctgtgacgcaacacgtatccgaccacccgaatctctaccgtaccttct
tagaaagtaggggtggcatgacgaaatacttgaacgtcatgaaacaatcccgggaatgggctaccgacactgagattatg
gcaacagctacgctgctgaaatcggtagtgatggtatatttcccttgtcaggtgggaacaaggttcgaataccgttggca
ggaatttaaacctctggacaaccccgatatcacgtatcctattatttatctcgcaaacaaaaatgaacattttgaaccag
ttctggatatcgaactcgaggaaatggcccaaacaagcattcaaaaggaaagtggtcaaaaacaaagaggaaagggacat
gaattttga

Protein
Protein IDpfu_aug1.0_5035.1_23717.t1
Definition-
>pfu_aug1.0_5035.1_23717.t1
MFQTTYQDHFNRKSTQKQRGYEPGGRAKYDTNGSSDSVSSLKRREKGRTVSQERTIEEPIPVTEEEEIEDMSGRKTVRSK
GKPLPKPSPKTEVKHRANKDGKDAVVKDSGKPETEVSVEDLGPPSVFYPVTPGWQMTNAKKLGVRIQRTLNFGTQKRFYA
TTPPRMTEPVRGDGNCFFRAICSLITGSESDHMDVRKAVTQHVSDHPNLYRTFLESRGGMTKYLNVMKQSREWATDTEIM
ATATLLKSVVMVYFPCQVGTRFEYRWQEFKPLDNPDITYPIIYLANKNEHFEPVLDIELEEMAQTSIQKESGQKQRGKGH
EF

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