Gene
| Gene Model ID | pfu_aug1.0_5035.1_23718 |
|---|---|
| Locus | scaffold5035.1 : 39147 ... 52893 : - |
| To GenomeBrowser | scaffold5035.1:39147..52893 |
| Genes list of scaffold | scaffold5035.1 |
| Synonym | pfu_aug2.0_1088.1_28046 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5035.1_23718.t1 | 1 | 1 | HAD_2 | 9 | 132 | 1.5e-16 | 61.1 | 3.9e-20 | 1.9e-16 | 60.7 |
| pfu_aug1.0_5035.1_23718.t1 | 1 | 1 | Hydrolase | 27 | 126 | 7.5e-08 | 33.0 | 2.0e-11 | 1.0e-07 | 32.6 |
| pfu_aug1.0_5035.1_23718.t1 | 2 | 1 | Hydrolase_like | 46 | 55 | 7.9e-09 | 35.1 | 0.41 | 2000.0 | -1.5 |
| pfu_aug1.0_5035.1_23718.t1 | 2 | 2 | Hydrolase_like | 85 | 154 | 7.9e-09 | 35.1 | 4.7e-12 | 2.3e-08 | 33.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5035.1_23718.t1 | gi|347969790|ref|XP_314275.5| | AGAP003372-PA [Anopheles gambiae str. PEST] | 8.96831e-44 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5035.1_23718.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5035.1_23718.t1 atgcactagagctgcctataacagtagatgaatttttagaacgttcccatgctgaacagaataggttgttccccttagtc ccattgatgccaggtgcagataaactagtgcgacacctccataaatgtaacgtccctattgctgtagcgacaggatccaa cactcagagttttgcattgaaatcatccgggcataaagagtttttcagtctgtttcatcacacagtactaagtggggacg accctgaggtggaacatggtaaaccagcacctgactgcttcttactggctgctaaacgattcaaagacagccccgaccct gcaaaggttttggtatttgaggatgcacctaatggcgtagatgcagctcacgcagcaggaatgcagtgtgtttgggtacc acatgatgagcaggaccataatacacacaaacacaaatgtacacaaatactggacaatctggaaaactttataccagaat cctttggtttaccagcatacacttcatga |
|
Protein
| Protein ID | pfu_aug1.0_5035.1_23718.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5035.1_23718.t1 ALELPITVDEFLERSHAEQNRLFPLVPLMPGADKLVRHLHKCNVPIAVATGSNTQSFALKSSGHKEFFSLFHHTVLSGDD PEVEHGKPAPDCFLLAAKRFKDSPDPAKVLVFEDAPNGVDAAHAAGMQCVWVPHDEQDHNTHKHKCTQILDNLENFIPES FGLPAYTS |
|