Gene
| Gene Model ID | pfu_aug1.0_50463.1_63379 |
|---|---|
| Locus | scaffold50463.1 : 1 ... 4318 : - |
| To GenomeBrowser | scaffold50463.1:1..4318 |
| Genes list of scaffold | scaffold50463.1 |
| Synonym | pfu_aug2.0_594.1_14362 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_50463.1_63379.t1 | 1 | 1 | AIG1 | 12 | 114 | 8.1e-08 | 31.6 | 2.8e-11 | 1.4e-07 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_50463.1_63379.t1 | gi|327289059|ref|XP_003229242.1| | PREDICTED: uncharacterized protein LOC100560804 [Anolis carolinensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_50463.1_63379.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_50463.1_63379.t1 gacaagtcgcagactgaatggataacttgctataccatcaaaagaatgaaaaggagcaagatcgactatgacttgaatat catagatacacctggctttggagatacccgaggaccagagcgtgacgatcaaataagagttcagatagaaaggttcttca aagagaccaacagagctgggattcaaactattgatgctgtctgctttgttgttacaccgcagcctcgactgaacgcacca cagaagtacatttttgatcgtgtgttgagcatgtttggaaaggacattgaacgcaatattttcatgttggttacgtatgc cgatgccgctgaaccacctgtgctggctgctctgaaggaggataacattcaatatgaagattattttaagttcaataatt cagccctttttgtgtcgaatgaaaagccgggggacgatgacatacacaacaaaagaacagaatggcaaggtcacaaactg aactggaaaatgggaatgaacagctttcagacttttttcgaagcaattcagaccttcacaccgcgaagtctagtaatgac ttcggaggtactcgatgctcaaatcaaacttaaatctgttgtccagggtctacaccattatattgtacgtcttgttaatg atatgcaaactttgaaagatacatgtaaatccatagacatacacagggatgatattgagaaaaataaagacttcgaatat actgtacaggaaactgagagaaaagaagagccgattccatctaaattcatgcatatggcaacaaattgtctaaattgtaa aaa |
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Protein
| Protein ID | pfu_aug1.0_50463.1_63379.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_50463.1_63379.t1 DKSQTEWITCYTIKRMKRSKIDYDLNIIDTPGFGDTRGPERDDQIRVQIERFFKETNRAGIQTIDAVCFVVTPQPRLNAP QKYIFDRVLSMFGKDIERNIFMLVTYADAAEPPVLAALKEDNIQYEDYFKFNNSALFVSNEKPGDDDIHNKRTEWQGHKL NWKMGMNSFQTFFEAIQTFTPRSLVMTSEVLDAQIKLKSVVQGLHHYIVRLVNDMQTLKDTCKSIDIHRDDIEKNKDFEY TVQETERKEEPIPSKFMHMATNCLNCK |
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