Gene
| Gene Model ID | pfu_aug1.0_505.1_29301 |
|---|---|
| Locus | scaffold505.1 : 65686 ... 74648 : + |
| To GenomeBrowser | scaffold505.1:65686..74648 |
| Genes list of scaffold | scaffold505.1 |
| Synonym | pfu_aug2.0_879.1_31240 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_505.1_29301.t1 | 2 | 1 | Thi4 | 8 | 46 | 2.3e-08 | 33.4 | 3.1e-10 | 2.3e-07 | 30.1 |
| pfu_aug1.0_505.1_29301.t1 | 1 | 1 | FAD_binding_3 | 9 | 41 | 1.4e-06 | 27.6 | 2.8e-09 | 2.1e-06 | 27.0 |
| pfu_aug1.0_505.1_29301.t1 | 1 | 1 | FAD_binding_2 | 10 | 47 | 1.4e-08 | 34.0 | 3.2e-11 | 2.4e-08 | 33.2 |
| pfu_aug1.0_505.1_29301.t1 | 1 | 1 | DAO | 10 | 45 | 7.4e-08 | 31.6 | 1.5e-10 | 1.1e-07 | 31.0 |
| pfu_aug1.0_505.1_29301.t1 | 1 | 1 | Pyr_redox | 11 | 47 | 9.4e-07 | 29.1 | 3.3e-09 | 2.5e-06 | 27.8 |
| pfu_aug1.0_505.1_29301.t1 | 1 | 1 | Pyr_redox_3 | 12 | 51 | 2.8e-06 | 27.5 | 5.1e-09 | 3.8e-06 | 27.1 |
| pfu_aug1.0_505.1_29301.t1 | 1 | 1 | NAD_binding_8 | 13 | 78 | 2.0e-14 | 53.3 | 4.9e-17 | 3.6e-14 | 52.5 |
| pfu_aug1.0_505.1_29301.t1 | 1 | 1 | Amino_oxidase | 18 | 133 | 1.1e-19 | 70.8 | 1.7e-22 | 1.3e-19 | 70.6 |
| pfu_aug1.0_505.1_29301.t1 | 2 | 2 | Thi4 | 86 | 170 | 2.3e-08 | 33.4 | 0.23 | 170.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_505.1_29301.t1 | gi|46407150|emb|CAD89351.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_505.1_29301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_505.1_29301.t1 atggaggatcacaacatgcctagtgccgatgtggttgttataggggctggattaagtggattgagtgcagcaaagatatt acacgaacgaggtctgaatgtcattgttctggaagcccgtgaccgagtaggtgggagaacttatacacttcggaacgaag atgtgacatatgtagatttgggtggctcctatgtaggtcccacccagaacaggattttacgtctggctgatgagattgga atccagaccttcctcactcaagatacagaggatttgatttttcattcaaagggacgctccaaaaagataactggtgctgt tcctcccgtttccggtctgctggccacacttgacgtgaacaatctttttagagaaatagacgaaatgggagaagagatac cagtcgatgctccctgggatgctccacatgcggaagagtgggacaagatgacagtaaaagagtttttcaataaaactatt tggaccaaaataatggggatgaaatatcttgaagtaaaaaactacgtgtatctcgcactttacacgttcactggcgacgt gttacttgtaaagcaaatgacgtcaaacgcagtaaatgatgacgtcacaatagccgactag |
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Protein
| Protein ID | pfu_aug1.0_505.1_29301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_505.1_29301.t1 MEDHNMPSADVVVIGAGLSGLSAAKILHERGLNVIVLEARDRVGGRTYTLRNEDVTYVDLGGSYVGPTQNRILRLADEIG IQTFLTQDTEDLIFHSKGRSKKITGAVPPVSGLLATLDVNNLFREIDEMGEEIPVDAPWDAPHAEEWDKMTVKEFFNKTI WTKIMGMKYLEVKNYVYLALYTFTGDVLLVKQMTSNAVNDDVTIAD |
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