Gene
| Gene Model ID | pfu_aug1.0_5050.1_01889 |
|---|---|
| Locus | scaffold5050.1 : 3615 ... 17035 : - |
| To GenomeBrowser | scaffold5050.1:3615..17035 |
| Genes list of scaffold | scaffold5050.1 |
| Synonym | pfu_aug2.0_154.1_13699 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5050.1_01889.t1 | 1 | 1 | adh_short | 326 | 382 | 7.8e-07 | 29.1 | 3.6e-10 | 1.3e-06 | 28.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5050.1_01889.t1 | gi|291227055|ref|XP_002733500.1| | PREDICTED: inactive hydroxysteroid dehydrogenase-like protein 1-like [Saccoglossus kowalevskii] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_5050.1_01889.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5050.1_01889.t1 atgattgatccattgggttataacgagaaatatgccttgcgttcgattgcgagaacctatctaaaaaattgtttgtccag attgtcgtctatccagtttgccgtctgtatgtccagattgtcatctatccatttgccgtctgtatatgtcccgattgttc agatataccaatacattaagaatggcgagttgaataaactggcttcaaatctattgtcgtctgttcgtccagaagctcgt ctgtatgccaagactgtcgtttggctgtccagatatcgtctgtatgtccagaatgacgactgtttgtccagattgtcgtt tgtctatctagattgccgtccatctgtccagattgtcgactatgtacaacgtatatgtctagattgccgtctgtctgtcc agattaccgtctgcacgtccagactctcgtctgtctgtctgtccagattgtcggttgtatgtccagattgccgtgtatca aactatcgtctgtccagattgccgaccgtctgtccagattatcgtatgtccagattgtcgtctgaccagattgccgccta ttgccgtctgtttttcaatactgtcatacgtttgtccggactgtcgactttccagactatcgactgcatgtccagattac cgtctgtcctgattgttgtttgtcgtcttgctgactgtccaaatcactatatgtctataagactacagatggggcttatc gaaagaaaacgtgtaaggcggcgatatcaagcaagacatacatacctcagaccaatcgcacaatttcgggcctttatgtg ggtttctgcaatcacgtggacacttctagacagtgattttcaagatcaggagtcaaaagtcgagatcactattggtaatg ataaactctgtggacagtctaaagatcacaatttactttggaaatcaattttcaatcatgttcagagccagaggacgata cctattgtgtctcaagtgatcacaggtagtagcgaggggataggtaaggcttatgctcgggagctagctaggaggaaagt gaatgttgtacttattagcaggggagaaaacagattgtacaaaacagcaagagaaatagaagaggaatttggagtggaga cttgcactgtgccagtagattttaaccttggaccagatgtatttagtacaatatggaatgccatcaaagataaggaaata ggtatattagtcgtaccagtggttactggcctcatacaatacagtcatggttttctgagagcataccagagtggctttgg atgtggggagcaaccagactga |
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Protein
| Protein ID | pfu_aug1.0_5050.1_01889.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5050.1_01889.t1 MIDPLGYNEKYALRSIARTYLKNCLSRLSSIQFAVCMSRLSSIHLPSVYVPIVQIYQYIKNGELNKLASNLLSSVRPEAR LYAKTVVWLSRYRLYVQNDDCLSRLSFVYLDCRPSVQIVDYVQRICLDCRLSVQITVCTSRLSSVCLSRLSVVCPDCRVS NYRLSRLPTVCPDYRMSRLSSDQIAAYCRLFFNTVIRLSGLSTFQTIDCMSRLPSVLIVVCRLADCPNHYMSIRLQMGLI ERKRVRRRYQARHTYLRPIAQFRAFMWVSAITWTLLDSDFQDQESKVEITIGNDKLCGQSKDHNLLWKSIFNHVQSQRTI PIVSQVITGSSEGIGKAYARELARRKVNVVLISRGENRLYKTAREIEEEFGVETCTVPVDFNLGPDVFSTIWNAIKDKEI GILVVPVVTGLIQYSHGFLRAYQSGFGCGEQPD |
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