Gene
| Gene Model ID | pfu_aug1.0_5052.1_45101 |
|---|---|
| Locus | scaffold5052.1 : 27246 ... 38596 : + |
| To GenomeBrowser | scaffold5052.1:27246..38596 |
| Genes list of scaffold | scaffold5052.1 |
| Synonym | pfu_aug2.0_14.1_13370 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5052.1_45101.t1 | 2 | 1 | UCH | 30 | 57 | 4.4e-19 | 68.6 | 0.77 | 3800.0 | -3.3 |
| pfu_aug1.0_5052.1_45101.t1 | 3 | 1 | MATH | 47 | 67 | 2.4e-17 | 63.2 | 0.65 | 3200.0 | -1.7 |
| pfu_aug1.0_5052.1_45101.t1 | 3 | 1 | UCH_1 | 72 | 72 | 2.1e-10 | 40.5 | 0.48 | 2400.0 | -2.4 |
| pfu_aug1.0_5052.1_45101.t1 | 3 | 2 | MATH | 113 | 235 | 2.4e-17 | 63.2 | 4.9e-21 | 2.4e-17 | 63.2 |
| pfu_aug1.0_5052.1_45101.t1 | 2 | 2 | UCH | 253 | 434 | 4.4e-19 | 68.6 | 9.0e-23 | 4.4e-19 | 68.6 |
| pfu_aug1.0_5052.1_45101.t1 | 3 | 2 | UCH_1 | 253 | 340 | 2.1e-10 | 40.5 | 2.8e-12 | 1.4e-08 | 34.5 |
| pfu_aug1.0_5052.1_45101.t1 | 3 | 3 | MATH | 311 | 334 | 2.4e-17 | 63.2 | 0.32 | 1600.0 | -0.7 |
| pfu_aug1.0_5052.1_45101.t1 | 3 | 3 | UCH_1 | 343 | 420 | 2.1e-10 | 40.5 | 0.0096 | 47.0 | 3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5052.1_45101.t1 | gi|332030782|gb|EGI70458.1| | Ubiquitin carboxyl-terminal hydrolase 7 [Acromyrmex echinatior] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5052.1_45101.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5052.1_45101.t1 atgagcgacattggtcgcatcgtgagcaaacaggcgaaagtgaccgtcccgccaaaaagtcctcaaactcccgggcgaga tcgccagaaaacggtcactcaaaataatctcaacaacaccatgaatcatgtaaatgaccgtggtggaaatgagcacaatc agaaagatgtcgatatggaaaacgaggaaaaagatgaggagggtcaggagggaggagttgatgccaacatgacaccccta aatggagacatccaagatgggggagcttcaaaccaagaggagcaagacatggaggaggatgagagtcgtgcggagacaac tttccggcacacatttgagaatatcagtaaactgaaggatacagcactcagtcctccatgtatggtcagaaacttaccat ggaaaatcatggccatgccaagggtaagccaaaatccagaaagacacaaccagaagaccttaggattttttcttcagtgc aatggggagtcggactcatcgtcttggtcatgtaatgcatcggctcaattgaaaatactcaatcacaatcctgatggaga gccattcgtaagaaagatacaacatcttttctacagtaaggaaaatgattggggatacagccatttcatggcgtggaatg atatgatggatccaagcaaaggctttgtaaaagatgacaagatcacgttagaggtatatgtcaaggctgacgccccacat ggagtaagttgggattctaaaaagcatacaggatttgttggactaaagaatcaaggtgccacatgctacatgaactctct actacaaactctattcttcactaaccagctaaggaaggctgtgtatttgatgccaacagagagtgatgatgccacaaaga gtgtccctctagctctacagagagtattttatgaacttcaattcagtgacaaacctgttggtacaaagaaacttacaaag tcatttggatgggagactttagacacattcatgcaacatgatgtacaggaactttgtcgagtgtcatatattcgctgtaa gcatgttgattactgttcccagaaagaggaggcattttatgatattcagcttaacctcaaaggaaagaaaaatgtgttgg agtcatttgcagattacatcaaggaagaaagtttagatggggacaataagtatgatgcaggggactatggtttacaggaa gcagagaagggtgtgtcatttattagttttccaccagttttacatctacatttactaaggtttatgtacgatcctatagc agatgcttatgtcaagattaatgatag |
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Protein
| Protein ID | pfu_aug1.0_5052.1_45101.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5052.1_45101.t1 MSDIGRIVSKQAKVTVPPKSPQTPGRDRQKTVTQNNLNNTMNHVNDRGGNEHNQKDVDMENEEKDEEGQEGGVDANMTPL NGDIQDGGASNQEEQDMEEDESRAETTFRHTFENISKLKDTALSPPCMVRNLPWKIMAMPRVSQNPERHNQKTLGFFLQC NGESDSSSWSCNASAQLKILNHNPDGEPFVRKIQHLFYSKENDWGYSHFMAWNDMMDPSKGFVKDDKITLEVYVKADAPH GVSWDSKKHTGFVGLKNQGATCYMNSLLQTLFFTNQLRKAVYLMPTESDDATKSVPLALQRVFYELQFSDKPVGTKKLTK SFGWETLDTFMQHDVQELCRVSYIRCKHVDYCSQKEEAFYDIQLNLKGKKNVLESFADYIKEESLDGDNKYDAGDYGLQE AEKGVSFISFPPVLHLHLLRFMYDPIADAYVKIND |
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