Gene
| Gene Model ID | pfu_aug1.0_5059.1_59690 |
|---|---|
| Locus | scaffold5059.1 : 26475 ... 34025 : - |
| To GenomeBrowser | scaffold5059.1:26475..34025 |
| Genes list of scaffold | scaffold5059.1 |
| Synonym | pfu_aug2.0_302.1_07330 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5059.1_59690.t1 | 1 | 1 | AAA_25 | 57 | 121 | 4.2e-06 | 26.2 | 1.4e-09 | 5.3e-06 | 25.9 |
| pfu_aug1.0_5059.1_59690.t1 | 1 | 1 | Rad51 | 58 | 124 | 6.6e-14 | 51.4 | 2.1e-17 | 7.7e-14 | 51.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5059.1_59690.t1 | gi|115631505|ref|XP_787572.2| | 5.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5059.1_59690.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5059.1_59690.t1 atgtttgttttgatagccaagtgcagtctacagacatcagatattttggcgacattttttttcattatgtcttcgcacgt gaataactggaaacttaacagtaaaactttgatgaattatgatgtaacaaaattccaaagtatgccaaataacttgatgt cggtagtctgcttggacaaacttctagatgggggattgtacacatctgaagtgacagaagttgctggggaaatagcagct ggcaaaactcagctatgtttaacggcagcagttagtgcctgtggggattccagacagagcgtattatatatagatacttg tgggggctttgttgccgaaagactagctgaaatagcggaaaatagatatggaactcaggtacattga |
|
Protein
| Protein ID | pfu_aug1.0_5059.1_59690.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5059.1_59690.t1 MFVLIAKCSLQTSDILATFFFIMSSHVNNWKLNSKTLMNYDVTKFQSMPNNLMSVVCLDKLLDGGLYTSEVTEVAGEIAA GKTQLCLTAAVSACGDSRQSVLYIDTCGGFVAERLAEIAENRYGTQVH |
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