Gene
| Gene Model ID | pfu_aug1.0_506.1_58154 |
|---|---|
| Locus | scaffold506.1 : 23826 ... 40592 : + |
| To GenomeBrowser | scaffold506.1:23826..40592 |
| Genes list of scaffold | scaffold506.1 |
| Synonym | pfu_aug2.0_753.1_11162 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_506.1_58154.t1 | 2 | 1 | RRM_1 | 9 | 71 | 1.6e-41 | 139.7 | 7.4e-24 | 1.8e-20 | 72.3 |
| pfu_aug1.0_506.1_58154.t1 | 2 | 1 | RRM_6 | 9 | 68 | 1.2e-25 | 89.2 | 1.6e-15 | 3.8e-12 | 45.9 |
| pfu_aug1.0_506.1_58154.t1 | 2 | 1 | RRM_5 | 24 | 71 | 8.7e-21 | 73.5 | 1.6e-13 | 4.1e-10 | 39.3 |
| pfu_aug1.0_506.1_58154.t1 | 2 | 2 | RRM_1 | 272 | 341 | 1.6e-41 | 139.7 | 1.1e-21 | 2.8e-18 | 65.3 |
| pfu_aug1.0_506.1_58154.t1 | 2 | 2 | RRM_6 | 272 | 342 | 1.2e-25 | 89.2 | 6.4e-14 | 1.6e-10 | 40.8 |
| pfu_aug1.0_506.1_58154.t1 | 2 | 2 | RRM_5 | 286 | 345 | 8.7e-21 | 73.5 | 3.0e-11 | 7.4e-08 | 32.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_506.1_58154.t1 | gi|224090099|ref|XP_002187522.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_506.1_58154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_506.1_58154.t1 atggttgccggagaggatagaaagctttttgttggcatgctcaataagcaacaaacagaagacgatgtaaggcagttgtt tcaaccatttggcggaattgaagagtgcacaatactacgggaccaaaatggaaacagcaaaggatgtgccttcgttaaat tcgcaaatcacaatgaagcgcagtctgcaatcagcgcattacacggaagtcagacgatgccgggagcatcatccagtctg gtcgtcaagtttgcagacactgagaaagaacgtcagcttagaagaatgcagcaaatggctggtccattaggcttgctgaa cccgtttgctctctctcagattggtgcttatggtgcatatgcccagcttgttcagcaacaagcagctctaatggcagcgg cagctacccaggggacgtacctgaccagtcctgtcaccacactggcccacatcccacaagtcggtactctggctacaccc aatgggataaccaccgcagccctcacccccacgacggctacgctggcaaatggtacagcatccctaagtggtgctcctcc cagcgttttatcgcccacgcccgtggccagtttccaggtacccacggccaacggccaggttccagaaatatacgctaacg gtatacctcactacgccgcacaaacaatgactaacggagacccgctccaaggggcttatgctagtgtacaaccttatgcc ggaatagcgtatccagcctacggaatccaacaagctctggcacaggcagcgctgttaccttcatccactaaagaaggtcc tgacgggtgtaatctcttcatctaccatctgccccaggagtttggggacgcggagctggcccaaatgttcatgccattcg gaaacgtcattagtgctaaagtttacgtcgatcgagcaaccaatcagagcaaatgctttggatttgtgagttttgacaac ccaacgagtgctcaagcggccatacaggccatgaatggattccagataggaatgaagcgtctaaaagttcaactcaaacg cccaaaggacgcaaatcgtccatactag |
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Protein
| Protein ID | pfu_aug1.0_506.1_58154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_506.1_58154.t1 MVAGEDRKLFVGMLNKQQTEDDVRQLFQPFGGIEECTILRDQNGNSKGCAFVKFANHNEAQSAISALHGSQTMPGASSSL VVKFADTEKERQLRRMQQMAGPLGLLNPFALSQIGAYGAYAQLVQQQAALMAAAATQGTYLTSPVTTLAHIPQVGTLATP NGITTAALTPTTATLANGTASLSGAPPSVLSPTPVASFQVPTANGQVPEIYANGIPHYAAQTMTNGDPLQGAYASVQPYA GIAYPAYGIQQALAQAALLPSSTKEGPDGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYVDRATNQSKCFGFVSFDN PTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY |
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