Gene
| Gene Model ID | pfu_aug1.0_5063.1_30861 |
|---|---|
| Locus | scaffold5063.1 : 3786 ... 28828 : + |
| To GenomeBrowser | scaffold5063.1:3786..28828 |
| Genes list of scaffold | scaffold5063.1 |
| Synonym | pfu_aug2.0_480.1_00806 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5063.1_30861.t1 | 1 | 1 | DUF3395 | 129 | 189 | 4.0e-12 | 46.0 | 1.2e-15 | 5.8e-12 | 45.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5063.1_30861.t1 | gi|15559568|gb|AAH14145.1| | DNAJC11 protein [Homo sapiens] | 4.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5063.1_30861.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5063.1_30861.t1 atgaagggaggagagagctgtatgacaagtttgggtacagtgtctgtcagtattaacctctcagattattttgatgagag ctatgtggacgatgactatggaaataaagtcttttgttataaagaagcatctgacattgacttaatatacgtgtatgaag aattagatgtaaaatatgtgacagtaggagttatgtcctctttctgccagctcagctatgagagaaagttccaagatcac ggatttaaattaagagtggttggaaaattgagtacaactggagcaatattacagtatggatgtgaaaagaaaatatcaca gttcagttggttgagtggtacgatgtctgtcggtacgtccggggtatcgttagatgttaggaaacaagacaatgtcaaag aagaacagttagagaaattaagacaaaagaaacaggaagctgctgccacgattgaactaatgaaagaaaccgtggagaga aatatagaatacgaagaaagaaggaatggtctgattatagtaaaggctgtgtatgggcagcttataacacaggatggcaa aaagtcaaaaaggtcatatgtgttacttacgacctttcaattctacagcgtcaattaa |
|
Protein
| Protein ID | pfu_aug1.0_5063.1_30861.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5063.1_30861.t1 MKGGESCMTSLGTVSVSINLSDYFDESYVDDDYGNKVFCYKEASDIDLIYVYEELDVKYVTVGVMSSFCQLSYERKFQDH GFKLRVVGKLSTTGAILQYGCEKKISQFSWLSGTMSVGTSGVSLDVRKQDNVKEEQLEKLRQKKQEAAATIELMKETVER NIEYEERRNGLIIVKAVYGQLITQDGKKSKRSYVLLTTFQFYSVN |
|