Gene
| Gene Model ID | pfu_aug1.0_5064.1_16574 |
|---|---|
| Locus | scaffold5064.1 : 8171 ... 23905 : - |
| To GenomeBrowser | scaffold5064.1:8171..23905 |
| Genes list of scaffold | scaffold5064.1 |
| Synonym | pfu_aug2.0_276.1_20554 |
Manual annotation
| Study field | Metabolism |
|---|---|
| Gene name | Pfu-mantle protein 9 like |
| Description | NCBI blastx best hit to AAZ22318.1 This gene contains Kazal-type serine protease inhibitor domain. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5064.1_16574.t1 | 2 | 1 | Kazal_1 | 27 | 65 | 2.6e-15 | 56.1 | 2.8e-11 | 8.4e-08 | 32.1 |
| pfu_aug1.0_5064.1_16574.t1 | 2 | 1 | Kazal_2 | 31 | 54 | 2.9e-10 | 39.8 | 1.2e-08 | 3.7e-05 | 23.5 |
| pfu_aug1.0_5064.1_16574.t1 | 2 | 2 | Kazal_1 | 73 | 107 | 2.6e-15 | 56.1 | 1.1e-09 | 3.2e-06 | 27.0 |
| pfu_aug1.0_5064.1_16574.t1 | 2 | 2 | Kazal_2 | 73 | 107 | 2.9e-10 | 39.8 | 5.2e-08 | 0.00015 | 21.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5064.1_16574.t1 | gi|221502088|gb|EEE27834.1| | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_5064.1_16574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5064.1_16574.t1 atgacttcctgtggttatctgtggattttggctgtaataccagtggctgtgatagctaagattccaacaaaccctgttgc agattgcatttgtccggcggtaatccttccagtctgtggaacagatggaaaaacctacaataatgactgtctacgacaat gcagcggtgtaccaaaggcatcagatggtccatgtggcgcaacaggagattgcatttgtccggcagtagttataccagtt tgtggaatcgatggcaagacttacaacaatgactgtcttcgacaatgcagcggtgtatcaaaggcttctgatggtccatg tggcgctgcaggaggggtattccaaaggcatcagatggaaaatgttttggaattgggggagattgcatttgcccagcagt gtttgctccagtttgtggtattgatggaaaaacatactccaacgactgtcaacgacgatgcaagggaataccaaaggctt ctgatggtgcttgtgtcggtgtag |
|
Protein
| Protein ID | pfu_aug1.0_5064.1_16574.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5064.1_16574.t1 MTSCGYLWILAVIPVAVIAKIPTNPVADCICPAVILPVCGTDGKTYNNDCLRQCSGVPKASDGPCGATGDCICPAVVIPV CGIDGKTYNNDCLRQCSGVSKASDGPCGAAGGVFQRHQMENVLELGEIAFAQQCLLQFVVLMEKHTPTTVNDDAREYQRL LMVLVSV |
|