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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5064.1_16574
Locus scaffold5064.1 : 8171 ... 23905 : -
To GenomeBrowser scaffold5064.1:8171..23905
Genes list of scaffold scaffold5064.1
Synonym pfu_aug2.0_276.1_20554

Manual annotation
Study fieldMetabolism
Gene namePfu-mantle protein 9 like
DescriptionNCBI blastx best hit to AAZ22318.1 This gene contains Kazal-type serine protease inhibitor domain.
mRNA evidence

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5064.1_16574.t1 2 1 Kazal_1 27 65 2.6e-15 56.1 2.8e-11 8.4e-08 32.1
pfu_aug1.0_5064.1_16574.t1 2 1 Kazal_2 31 54 2.9e-10 39.8 1.2e-08 3.7e-05 23.5
pfu_aug1.0_5064.1_16574.t1 2 2 Kazal_1 73 107 2.6e-15 56.1 1.1e-09 3.2e-06 27.0
pfu_aug1.0_5064.1_16574.t1 2 2 Kazal_2 73 107 2.9e-10 39.8 5.2e-08 0.00015 21.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5064.1_16574.t1 gi|221502088|gb|EEE27834.1| 1.0e-15

Transcript
Transcript IDpfu_aug1.0_5064.1_16574.t1
Definition-
>pfu_aug1.0_5064.1_16574.t1
atgacttcctgtggttatctgtggattttggctgtaataccagtggctgtgatagctaagattccaacaaaccctgttgc
agattgcatttgtccggcggtaatccttccagtctgtggaacagatggaaaaacctacaataatgactgtctacgacaat
gcagcggtgtaccaaaggcatcagatggtccatgtggcgcaacaggagattgcatttgtccggcagtagttataccagtt
tgtggaatcgatggcaagacttacaacaatgactgtcttcgacaatgcagcggtgtatcaaaggcttctgatggtccatg
tggcgctgcaggaggggtattccaaaggcatcagatggaaaatgttttggaattgggggagattgcatttgcccagcagt
gtttgctccagtttgtggtattgatggaaaaacatactccaacgactgtcaacgacgatgcaagggaataccaaaggctt
ctgatggtgcttgtgtcggtgtag

Protein
Protein IDpfu_aug1.0_5064.1_16574.t1
Definition-
>pfu_aug1.0_5064.1_16574.t1
MTSCGYLWILAVIPVAVIAKIPTNPVADCICPAVILPVCGTDGKTYNNDCLRQCSGVPKASDGPCGATGDCICPAVVIPV
CGIDGKTYNNDCLRQCSGVSKASDGPCGAAGGVFQRHQMENVLELGEIAFAQQCLLQFVVLMEKHTPTTVNDDAREYQRL
LMVLVSV

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