Gene
| Gene Model ID | pfu_aug1.0_5066.1_23724 |
|---|---|
| Locus | scaffold5066.1 : 13064 ... 27497 : - |
| To GenomeBrowser | scaffold5066.1:13064..27497 |
| Genes list of scaffold | scaffold5066.1 |
| Synonym | pfu_aug2.0_106.1_20253 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5066.1_23724.t1 | 2 | 1 | zf-met | 2 | 11 | 1.1e-07 | 31.8 | 0.08 | 240.0 | 2.1 |
| pfu_aug1.0_5066.1_23724.t1 | 1 | 1 | DnaJ | 10 | 72 | 2.3e-26 | 91.3 | 7.6e-30 | 2.3e-26 | 91.3 |
| pfu_aug1.0_5066.1_23724.t1 | 1 | 1 | zf-C2H2_jaz | 248 | 272 | 3.9e-10 | 39.5 | 3.3e-13 | 9.7e-10 | 38.3 |
| pfu_aug1.0_5066.1_23724.t1 | 2 | 2 | zf-met | 248 | 271 | 1.1e-07 | 31.8 | 5.4e-11 | 1.6e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5066.1_23724.t1 | gi|126321579|ref|XP_001365540.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5066.1_23724.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5066.1_23724.t1 atggcctccaaaagttccatgaaatgtcattatgaagtgctcaatgtcagcagagacgccaattcagatgaactgaagaa atcttacaggaaactagctctaaaatggcatccagacaaaaatcctgatcaaatagaagaatgtacaaggcagttcagaa tcatacagcaggcctatgatgtgttgagtgatccccaggaaagggcctggtatgacaaacatagagaggctattctcagg ggaggaatgggtcatggagaatcatatacagatgatagcttggatgtctttcagtatttcaatacttcctgttttatggg ttacaatgatgatgaagaaggtttttatgctgtctaccgagaagttttcaacgtaatagatcatgaggatgatgaattca gagatgatgatgacgaggaatttaaagctcccgaatttggacagtcagacagttcttatgaagaggcattggttggtttt atcaagaaacgtgacaagagagtccaagcctataggaaaaagatggaggaaagaaatgaagaaattgcaagaaaagcaaa agagaaacaagaccagcataggagagaattactgaaacaagcagagaattacgaggataaaggatggtcggccatgacag agctagaggaagatttacagaagttagaatctcagtttacctcatcagaagaagaagaatgtggtgaagaggaggatgaa gaggagatttatgatgaaccattctgtgtggcatgtaataaattctttaaaagtgaaaaagcgctctcaaatcatgaacg ttccaagaagcataaagagaatgtggcattgttaaaggagcagatgcaggaagaagatgaggacctggtagaatcagggg gaggcactgaaaatcctcagaacgacgtgaattccgaggaagacagtgccgatcaggaaactcaaccaaccaaacaaaaa tccgcccatacattccaagaataa |
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Protein
| Protein ID | pfu_aug1.0_5066.1_23724.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5066.1_23724.t1 MASKSSMKCHYEVLNVSRDANSDELKKSYRKLALKWHPDKNPDQIEECTRQFRIIQQAYDVLSDPQERAWYDKHREAILR GGMGHGESYTDDSLDVFQYFNTSCFMGYNDDEEGFYAVYREVFNVIDHEDDEFRDDDDEEFKAPEFGQSDSSYEEALVGF IKKRDKRVQAYRKKMEERNEEIARKAKEKQDQHRRELLKQAENYEDKGWSAMTELEEDLQKLESQFTSSEEEECGEEEDE EEIYDEPFCVACNKFFKSEKALSNHERSKKHKENVALLKEQMQEEDEDLVESGGGTENPQNDVNSEEDSADQETQPTKQK SAHTFQE |
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