Gene
| Gene Model ID | pfu_aug1.0_507.1_36564 |
|---|---|
| Locus | scaffold507.1 : 72832 ... 80325 : - |
| To GenomeBrowser | scaffold507.1:72832..80325 |
| Genes list of scaffold | scaffold507.1 |
| Synonym | pfu_aug2.0_290.1_00553 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | retinal dehydrogenase 2 |
| Description | NCBI BLASTP hit to gb|ACL79834.1| |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_507.1_36564.t1 | 1 | 1 | Aldedh | 1 | 279 | 0.0 | 387.8 | 0.0 | 0.0 | 387.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_507.1_36564.t1 | gi|220067263|gb|ACL79834.1| | retinal dehydrogenase [Lymnaea stagnalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_507.1_36564.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_507.1_36564.t1 gtataccatctggtgtgcttaacgtggttccaggctacggacctacagctggagctgcactcacagggcatgcagacata aacaaagtggcatttactggatctactgagataggtcagttgatccttcaggcggcaggtcagtctaacctgaagagaac cactttagaactgggaggaaagtcacctaacgtcatatttgcggactgtgatttggattcagccgtgaaggaagcccagg aaggtgtgatggtcaatgctggtcagtgctgtgtggccggcagtcgtacgtttgtccaggaggagatctatgataagttt atcgaggccaccaaaaaactggcagagcagaggaaggttggggacccgtatgatttacagacatattatggtcctcagat tgatgaggagcagtttaacaagatcatggatctgatccaggcagggcagaaagagggggccaggctggtgacaggaggag gcagacttggtgaccagggatacttcatcaaacccaccgtgtttgctgatgtcaaagacaacatgagaatagcaaaagaa gagatttttggtccagttcagaacatcatcaagtttaagaccatggaggaggtcattgagagagctaacgatactacgta tggtttaggtgctgctgtcttcactaatgatctaaacaaggctatgacctttgctcaggccgtacaggctggaagtgtct ggataaactgctacaatgttgtaagaatccaggctccttttggaggtttcaaaatgtctggcattggcagagaattggga gaatatggaatccaaaactatttagaagtgaaaaatatctgcatgaaaattccacagaagaattcatag |
|
Protein
| Protein ID | pfu_aug1.0_507.1_36564.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_507.1_36564.t1 IPSGVLNVVPGYGPTAGAALTGHADINKVAFTGSTEIGQLILQAAGQSNLKRTTLELGGKSPNVIFADCDLDSAVKEAQE GVMVNAGQCCVAGSRTFVQEEIYDKFIEATKKLAEQRKVGDPYDLQTYYGPQIDEEQFNKIMDLIQAGQKEGARLVTGGG RLGDQGYFIKPTVFADVKDNMRIAKEEIFGPVQNIIKFKTMEEVIERANDTTYGLGAAVFTNDLNKAMTFAQAVQAGSVW INCYNVVRIQAPFGGFKMSGIGRELGEYGIQNYLEVKNICMKIPQKNS |
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