Gene
Gene Model ID | pfu_aug1.0_507.1_36564 |
---|---|
Locus | scaffold507.1 : 72832 ... 80325 : - |
To GenomeBrowser | scaffold507.1:72832..80325 |
Genes list of scaffold | scaffold507.1 |
Synonym | pfu_aug2.0_290.1_00553 |
Manual annotation
Study field | other developmental genes |
---|---|
Gene name | retinal dehydrogenase 2 |
Description | NCBI BLASTP hit to gb|ACL79834.1| |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_507.1_36564.t1 | 1 | 1 | Aldedh | 1 | 279 | 0.0 | 387.8 | 0.0 | 0.0 | 387.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_507.1_36564.t1 | gi|220067263|gb|ACL79834.1| | retinal dehydrogenase [Lymnaea stagnalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 2 |
egg-Dshape | 2 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 1 |
maleGonad | 1 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_507.1_36564.t1 |
---|---|
Definition | - |
>pfu_aug1.0_507.1_36564.t1 gtataccatctggtgtgcttaacgtggttccaggctacggacctacagctggagctgcactcacagggcatgcagacata aacaaagtggcatttactggatctactgagataggtcagttgatccttcaggcggcaggtcagtctaacctgaagagaac cactttagaactgggaggaaagtcacctaacgtcatatttgcggactgtgatttggattcagccgtgaaggaagcccagg aaggtgtgatggtcaatgctggtcagtgctgtgtggccggcagtcgtacgtttgtccaggaggagatctatgataagttt atcgaggccaccaaaaaactggcagagcagaggaaggttggggacccgtatgatttacagacatattatggtcctcagat tgatgaggagcagtttaacaagatcatggatctgatccaggcagggcagaaagagggggccaggctggtgacaggaggag gcagacttggtgaccagggatacttcatcaaacccaccgtgtttgctgatgtcaaagacaacatgagaatagcaaaagaa gagatttttggtccagttcagaacatcatcaagtttaagaccatggaggaggtcattgagagagctaacgatactacgta tggtttaggtgctgctgtcttcactaatgatctaaacaaggctatgacctttgctcaggccgtacaggctggaagtgtct ggataaactgctacaatgttgtaagaatccaggctccttttggaggtttcaaaatgtctggcattggcagagaattggga gaatatggaatccaaaactatttagaagtgaaaaatatctgcatgaaaattccacagaagaattcatag |
Protein
Protein ID | pfu_aug1.0_507.1_36564.t1 |
---|---|
Definition | - |
>pfu_aug1.0_507.1_36564.t1 IPSGVLNVVPGYGPTAGAALTGHADINKVAFTGSTEIGQLILQAAGQSNLKRTTLELGGKSPNVIFADCDLDSAVKEAQE GVMVNAGQCCVAGSRTFVQEEIYDKFIEATKKLAEQRKVGDPYDLQTYYGPQIDEEQFNKIMDLIQAGQKEGARLVTGGG RLGDQGYFIKPTVFADVKDNMRIAKEEIFGPVQNIIKFKTMEEVIERANDTTYGLGAAVFTNDLNKAMTFAQAVQAGSVW INCYNVVRIQAPFGGFKMSGIGRELGEYGIQNYLEVKNICMKIPQKNS |