Gene
| Gene Model ID | pfu_aug1.0_5080.1_16581 |
|---|---|
| Locus | scaffold5080.1 : 13996 ... 33415 : - |
| To GenomeBrowser | scaffold5080.1:13996..33415 |
| Genes list of scaffold | scaffold5080.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5080.1_16581.t1 | 1 | 1 | CRAL_TRIO_N | 17 | 43 | 1.8e-08 | 34.3 | 8.2e-12 | 4.0e-08 | 33.2 |
| pfu_aug1.0_5080.1_16581.t1 | 1 | 1 | CRAL_TRIO | 69 | 198 | 1.0e-27 | 96.5 | 3.3e-31 | 1.6e-27 | 95.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5080.1_16581.t1 | gi|260785883|ref|XP_002587989.1| | hypothetical protein BRAFLDRAFT_125389 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5080.1_16581.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5080.1_16581.t1 atgtgtatagtaaaacgtcatccaaacaaaccaattctatacggtttacaaagacggactgatgatgcttttctactccg ctttttacgagccaagaagtttgattacgatagagcatttaacctcttgttgactcactaccaaatgaggaaaaacaatg ctgagttgttctgtaatctacgaccctcggctgtgaaacacgttttagaggccggagttacaggtgtattacctcacaga gataaaaatggctgcaaagtcatagtatttagaccaggcttgtgggatccaggaagatttcctcttgatgacgttttcag gaccaattttatgacaatgtccaagatagttcaggatgaggcaactcaagtgaatggtgtactaatgttcatggatctga aagggattggattacagcatgcccgaaacatttcacctttttttgcaaagagagttatgtcccttatacaggatgcattc ccactacgatttaaaggactccactaccttaatgagccaacaatctttgattacatattttctattgtaaaaccgtttat gaaggaaaaaacaaagaacagaatctccgcacattttatttttaacgacataaaatga |
|
Protein
| Protein ID | pfu_aug1.0_5080.1_16581.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5080.1_16581.t1 MCIVKRHPNKPILYGLQRRTDDAFLLRFLRAKKFDYDRAFNLLLTHYQMRKNNAELFCNLRPSAVKHVLEAGVTGVLPHR DKNGCKVIVFRPGLWDPGRFPLDDVFRTNFMTMSKIVQDEATQVNGVLMFMDLKGIGLQHARNISPFFAKRVMSLIQDAF PLRFKGLHYLNEPTIFDYIFSIVKPFMKEKTKNRISAHFIFNDIK |
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