Gene
| Gene Model ID | pfu_aug1.0_5080.1_16582 |
|---|---|
| Locus | scaffold5080.1 : 33596 ... 53222 : + |
| To GenomeBrowser | scaffold5080.1:33596..53222 |
| Genes list of scaffold | scaffold5080.1 |
| Synonym | pfu_aug2.0_956.1_21294 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5080.1_16582.t1 | 1 | 1 | DEAD | 279 | 410 | 4.9e-09 | 35.9 | 1.9e-12 | 9.4e-09 | 34.9 |
| pfu_aug1.0_5080.1_16582.t1 | 1 | 1 | Helicase_C | 377 | 448 | 4.8e-17 | 61.5 | 2.1e-20 | 1.0e-16 | 60.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5080.1_16582.t1 | gi|115938662|ref|XP_797208.2| | 2.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5080.1_16582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5080.1_16582.t1 atggcttttttacaacggtatatgggagatgaggaggatacgagaacaccggcctcaaaatcagcagatatcctggccaa gataaaagcagacgcagagaaacgaagatccttaacgaagattggtgaaaaggaaaaaaatgttgatgatcataaagatg atttaaagaatggaaagtcattacttgaagatggcagaaaagtaaagaagagattgaatgacactgcggaagaggaagaa aaggcccaatcaagtaagaagaggaaaaagtcttcctctggtggagaagatgtggagaaggaagatgatcatgatgaatt tccacagaagaagaagaagcataagaaggaacgtaaaaatagctgtgagatgtgcggagatgatattaatgataaagaat ctcgtcaggtcattatgaagaagacgtcaggtgatgataagaagggagatgataaagacaatttagagctgttgaaaagt aaagataaaagtcccgtgaaaagtaaacattctgaaggtgggaagaagataaaatcaaagaaaatgaagcaagcaaagaa agattcccttgaagatgaaaaagaagattcatctggtgatgatgatgatttacttagtgaggaaataaacggtaaagaag tcggaggtttcacagtgctgggagaggagaagccgaaaacacccccacagttgggaaggctattacctgattggctggca tccccgtcccttgtttccgctgacctatcagcgtcttctcccattaaaacactgagcggcctagataccaggctcgttat aaagctaaaagaaaatggaataactgattttttcccagtacagctgcaagtaataccagagatcttgtctgaggtgcatt atgggtacaagacgggagttgcaggattccgtcccagtgatttatgcgtgtcagctccgacaggaagtggcaaaactctg acatttgtattacccataattcaggaagaatgtatggaatgtacttcagcagaaaggccgttattgatccttcattttct actcaatctcaagtatagccagattctatgttttacaaattctaaggactcggcacacagactgtgtcttcttctgaaac ttgtcggtggattcacgactcaggaggtcactggtaacacccatcacacaaagatgaccaaagccatcaagaagttctca cagggacagattgacatactggtgtgttctgatgccatggctagagggatggacttggtcaatgcaaggtatgtgttatc atacgatccccctaagctgctgacgacctacatacaccgagtgggacgaactgcacgagcaggaaaggaagggactgcta ttacatttgtgcaagatcaagagttttatcatttcaagaagatgacatcagctattagaagaacaggactgaataagata aaagtaccaaaagataaactggaaccgctagtgcctaaactacaagcagctctaaagaaactatcatttaagatcccaaa gaaaggtcgatccaagaaaaaacgtggtacgaaaaagaggaaatga |
|
Protein
| Protein ID | pfu_aug1.0_5080.1_16582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5080.1_16582.t1 MAFLQRYMGDEEDTRTPASKSADILAKIKADAEKRRSLTKIGEKEKNVDDHKDDLKNGKSLLEDGRKVKKRLNDTAEEEE KAQSSKKRKKSSSGGEDVEKEDDHDEFPQKKKKHKKERKNSCEMCGDDINDKESRQVIMKKTSGDDKKGDDKDNLELLKS KDKSPVKSKHSEGGKKIKSKKMKQAKKDSLEDEKEDSSGDDDDLLSEEINGKEVGGFTVLGEEKPKTPPQLGRLLPDWLA SPSLVSADLSASSPIKTLSGLDTRLVIKLKENGITDFFPVQLQVIPEILSEVHYGYKTGVAGFRPSDLCVSAPTGSGKTL TFVLPIIQEECMECTSAERPLLILHFLLNLKYSQILCFTNSKDSAHRLCLLLKLVGGFTTQEVTGNTHHTKMTKAIKKFS QGQIDILVCSDAMARGMDLVNARYVLSYDPPKLLTTYIHRVGRTARAGKEGTAITFVQDQEFYHFKKMTSAIRRTGLNKI KVPKDKLEPLVPKLQAALKKLSFKIPKKGRSKKKRGTKKRK |
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