Gene
| Gene Model ID | pfu_aug1.0_509.1_50917 |
|---|---|
| Locus | scaffold509.1 : 1 ... 12555 : - |
| To GenomeBrowser | scaffold509.1:1..12555 |
| Genes list of scaffold | scaffold509.1 |
| Synonym | pfu_aug2.0_4720.1_02654 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_509.1_50917.t1 | 1 | 1 | RVT_1 | 654 | 811 | 1.3e-17 | 63.9 | 8.0e-21 | 3.0e-17 | 62.7 |
| pfu_aug1.0_509.1_50917.t1 | 1 | 1 | rve | 1065 | 1177 | 2.2e-21 | 76.1 | 1.5e-24 | 5.7e-21 | 74.8 |
Transcript
| Transcript ID | pfu_aug1.0_509.1_50917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_509.1_50917.t1 atggctgcgtatcccggaatgaataacatatcgaagtggtgctggaaatcaaccacctggtatgcaaatgaattatgcaa atcaaactaccggtatacaagtaacctatccaccccaaagtgtacaatcaaatacagctgttccaaataccgtcgcatac ccccacctactgctagtgccccttacaatcagagcactgctcaatttcaaggtcagtttcaatatccaccatttggaccg caatcaaatatcagtactggctattcgcaacaaaacatgtatcccccaggtgccagtcaaggtccctttactccaggaat gtacatgactagtacgcctattatgtctgtcagttcgtatgggtttccaccaggaaatcagttcggacagggcagtcata ctccatattatgtatctagtgtccctcaatatggaccaactactcctattatgtcagtcgggccaaatgggttcccgcaa ggaaatcagtttggacctggctatccaaatcagtattcagttcataatacaccgccatacggaatgtgctacccagttaa ccaaggtaactttggccattatccaccgacctcnggtcaaggccagtataatcaaggaccttatccacctgtcccatatg cacagggtcaaggtcaagtccaaggtcagattaatcaacctaatccagtgcctcaaaatgttaatccaggctaccacatt aatgttaatcaaccaaataatcaagcatacaatcaagccaatcaaaatcaggctaaccagaaccaaggtaaccaaaatta caatgcacctatcaaccaaggtggtaatcgaggtgttaataatccaaaccaaggtaacaatggtggaaataaccaaagaa accaaaacgacccaaaaaggaatcaacgtaaccaacctattggtaatcgtcgcagagatggtatcgactccttaccaaag acgttaaggtacaatggcacggaaaactggaatgcattcaagcagaaatttaaccgctatgctgcagttaaagcttggaa tcaggaagaatgtaaggactatttatgtttttcccttgaaggcaaagtattagaattctttaaaactatcctacaaagag atgaagatttgatctatgatgacttaggtcagaaaatggataaacgatttggtgtacgagaaattccagagacggctcaa acaaaactggctacaatgaaacagcgctttgacgaaacaatagaagactgggcagatcgtgttctacaattagcaacaaa agcataccagaacctgccagatgaatttatgtataagcaggctgtgaaacgcatctgtctaggatgttgtgatcgtgagg ctggccagtacgctgcaaatttaagcctaacaaccattgaggataccattgacaagataaaagggtatcaacacaaccat caagctatctatgacaaaagtaaacgagaggtaaaggaaattagatgtgaagttgacgaatcattctctgactctaatca gtcggttaagatttgtcagacccgttctaatttccaaaagaagtcggagccaggtaaagaagaaacatcaaaattagacc ttcggcttagttctttggaaaatcagttaggatctctgatgatggaaatcaaagcgatgaacagaaaaattcaggattta tacaatagatcttgtgatatgctaagtgaagacgaacagttagctctaaaaaacttgctcattgaatatgccgatgtatt ttctgcgcatgaatatgatatcggtaatttcacggaaatccaacattgtattgacacaggtacatctttacctatcaaac aaaggttaccacgcacaccagtttgttttgttggagaagaggagaaacatttagagaaaatgatcaaagctcaagtaatt gaaccttcagtctctgaatgggcttctccacctgttctaatccgcaaaagggacggtagtgtgcgatggtgtgttgacta ccgagccttgaacaaagtcaccaagaaggatgtctttcctttgccccttgttgatgaatgtttagattcctcgtcaggaa acaaatggttttcaaaacttgacgcaacttggggatattggcaagtcaaaatcaaggactcagacaagtgcaaaacggca tttattaccaaatatggactattccagttcaaacgaatgccttttggactttgtaacgcaccagcgactttcagtagggt catgaaccttgttctaaaaggtcttcattggtcaattgttttggcatttttagacgatgttttggtacttgggacagatc cattcaaccatatcaacaccctcacggatgttttccaacgattccgtgaatatggtatcaaattgaaagcaaagaaatgc gacttattccagaccgaagttgaagaccttggacggacagtaggtagagatggtgtaaaggtgaatgcattgtcacgcct gaatgaatcagagttctatccattttaccaacctgacatcctacctagcgaaccaccatgtggaggatgtaagtactgca ccaaagtacatgaaaattggagtgcatttttcaatgacattgatgacatagttcccttggtaaaagttgacagatcacat aaagatcaagaaactcagtgtgacgtacccgatactaatgaacctgatattgaggacccacctaaaatgtgccaatcagt aagtaaagataacaagtcatgggttgatggttattcttggcagaacattagtcaaaaacagcaggcagatttagacttaa agtttatcgtctgttggttattgagaaatgaatgtccgtcggaatctgatttgtttcttagtagtaaagctgcgaaaaac tactggataaatcgagaactgtacgaaatggatgagaataagattctttggaaaaaggctacagaaagaagttcagagaa agctcttttagtccctagagatatgagaccagaagtcttaagtctatgtcacgatcttccatctaaaggacgccagggat atgaccgaaccttagaacgactaaaacttcgattttgttggtacgccatgtcacaagatgtcaggagatttgttacttca tgttccaaatgcaaccgtaacaaaaaggcaaaccggaaggctaggtgtgcgatgaaacagtttcatgcaggttctccaat ggagagggtacacttggactttctgggtcccttaccggttaccaagaggaacaactcctatatcttgatgatggtggacc agttcaccaaatgggtggaatgtgtacctttaccggaccaatcagcagaagctacagcacgagcggcagtaaacgagttc ttttcgagatttgggtacccctttcagatattcacagacagaggtactaatttcgaaagcattttgtttaggcaattgtg cgacaagcttgaaattcacaaaaccaggacaacaccatttagaccgtcagcacatggacaagttgagcgctacaatcgta ccctcatggatgctgtgcgatgctttgttagtaaaacccctaccctctgggatgagtacttgcctcaacttgcctgtgca ttgcgctctgctaaaaacagaagcacaggtttcactgcaaatatgctgatgttaggaagggaaattacaatgcctgttga tttagtatttccacctcctgaacagcaggatgaaaacagtgtagatcagtttgttcttaaccttcttgagcagatccaat tacttcatgaggttgctaggacaaatttgaagtcttcacagaatctgatgaaacgagattatgacctgaaaacctttact cgctcatatatgtctgtagatgtcttaagcctacagagaaaatatgaggcactgatgtccctgattcgtgccagtgtggg agaaaacgctagcctcgaggacgccatggcagcagtgacaaactctcaggacctgcccgctacatcagaaattcaccagg atcataccattgagatgaaagccttgtgccaattccagaagtgggaggaacctgagacctttaacatgcacccggtgaac tctccagctgttttgcttcattggcgttgtcagtgtggtagttctagtgataccgacaccaacaacaatgagccagatgt cgacgaatttcgtgcttttgatagccattttcatctggaccgcactagtcaacggctatggggaagtccacatggagcca cagtagaggaccttctacgaggaaccaaccagaccggacgacccagcctgaaggttcagcttgttgggggtgttatcgta cacagtgagccgcaaacttaccctgcagttttgtcgccaatgg |
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Protein
| Protein ID | pfu_aug1.0_509.1_50917.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_509.1_50917.t1 MAAYPGMNNISKWCWKSTTWYANELCKSNYRYTSNLSTPKCTIKYSCSKYRRIPPPTASAPYNQSTAQFQGQFQYPPFGP QSNISTGYSQQNMYPPGASQGPFTPGMYMTSTPIMSVSSYGFPPGNQFGQGSHTPYYVSSVPQYGPTTPIMSVGPNGFPQ GNQFGPGYPNQYSVHNTPPYGMCYPVNQGNFGHYPPTXGQGQYNQGPYPPVPYAQGQGQVQGQINQPNPVPQNVNPGYHI NVNQPNNQAYNQANQNQANQNQGNQNYNAPINQGGNRGVNNPNQGNNGGNNQRNQNDPKRNQRNQPIGNRRRDGIDSLPK TLRYNGTENWNAFKQKFNRYAAVKAWNQEECKDYLCFSLEGKVLEFFKTILQRDEDLIYDDLGQKMDKRFGVREIPETAQ TKLATMKQRFDETIEDWADRVLQLATKAYQNLPDEFMYKQAVKRICLGCCDREAGQYAANLSLTTIEDTIDKIKGYQHNH QAIYDKSKREVKEIRCEVDESFSDSNQSVKICQTRSNFQKKSEPGKEETSKLDLRLSSLENQLGSLMMEIKAMNRKIQDL YNRSCDMLSEDEQLALKNLLIEYADVFSAHEYDIGNFTEIQHCIDTGTSLPIKQRLPRTPVCFVGEEEKHLEKMIKAQVI EPSVSEWASPPVLIRKRDGSVRWCVDYRALNKVTKKDVFPLPLVDECLDSSSGNKWFSKLDATWGYWQVKIKDSDKCKTA FITKYGLFQFKRMPFGLCNAPATFSRVMNLVLKGLHWSIVLAFLDDVLVLGTDPFNHINTLTDVFQRFREYGIKLKAKKC DLFQTEVEDLGRTVGRDGVKVNALSRLNESEFYPFYQPDILPSEPPCGGCKYCTKVHENWSAFFNDIDDIVPLVKVDRSH KDQETQCDVPDTNEPDIEDPPKMCQSVSKDNKSWVDGYSWQNISQKQQADLDLKFIVCWLLRNECPSESDLFLSSKAAKN YWINRELYEMDENKILWKKATERSSEKALLVPRDMRPEVLSLCHDLPSKGRQGYDRTLERLKLRFCWYAMSQDVRRFVTS CSKCNRNKKANRKARCAMKQFHAGSPMERVHLDFLGPLPVTKRNNSYILMMVDQFTKWVECVPLPDQSAEATARAAVNEF FSRFGYPFQIFTDRGTNFESILFRQLCDKLEIHKTRTTPFRPSAHGQVERYNRTLMDAVRCFVSKTPTLWDEYLPQLACA LRSAKNRSTGFTANMLMLGREITMPVDLVFPPPEQQDENSVDQFVLNLLEQIQLLHEVARTNLKSSQNLMKRDYDLKTFT RSYMSVDVLSLQRKYEALMSLIRASVGENASLEDAMAAVTNSQDLPATSEIHQDHTIEMKALCQFQKWEEPETFNMHPVN SPAVLLHWRCQCGSSSDTDTNNNEPDVDEFRAFDSHFHLDRTSQRLWGSPHGATVEDLLRGTNQTGRPSLKVQLVGGVIV HSEPQTYPAVLSPM |
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