Gene
| Gene Model ID | pfu_aug1.0_5102.1_59699 |
|---|---|
| Locus | scaffold5102.1 : 3459 ... 11565 : - |
| To GenomeBrowser | scaffold5102.1:3459..11565 |
| Genes list of scaffold | scaffold5102.1 |
| Synonym | pfu_aug2.0_784.1_14556 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5102.1_59699.t1 | 7 | 1 | Cadherin_2 | 23 | 112 | 1.2e-14 | 53.6 | 1.2e-11 | 4.6e-08 | 32.5 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 1 | Cadherin | 55 | 98 | 0.0 | 317.4 | 2.2e-07 | 0.0008 | 19.6 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 2 | Cadherin | 148 | 241 | 0.0 | 317.4 | 1.2e-12 | 4.6e-09 | 36.4 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 2 | Cadherin_2 | 200 | 213 | 1.2e-14 | 53.6 | 0.034 | 130.0 | 2.2 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 3 | Cadherin | 255 | 349 | 0.0 | 317.4 | 2.4e-21 | 8.9e-18 | 64.3 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 3 | Cadherin_2 | 258 | 314 | 1.2e-14 | 53.6 | 0.5 | 1800.0 | -1.5 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 4 | Cadherin | 371 | 456 | 0.0 | 317.4 | 9.6e-14 | 3.5e-10 | 39.9 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 4 | Cadherin_2 | 401 | 427 | 1.2e-14 | 53.6 | 0.28 | 1000.0 | -0.7 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 5 | Cadherin | 472 | 559 | 0.0 | 317.4 | 4.2e-21 | 1.6e-17 | 63.5 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 5 | Cadherin_2 | 507 | 531 | 1.2e-14 | 53.6 | 0.0037 | 14.0 | 5.3 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 6 | Cadherin | 574 | 666 | 0.0 | 317.4 | 2.1e-19 | 7.8e-16 | 58.1 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 6 | Cadherin_2 | 575 | 601 | 1.2e-14 | 53.6 | 0.0055 | 20.0 | 4.8 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 7 | Cadherin | 693 | 770 | 0.0 | 317.4 | 2.8e-14 | 1.0e-10 | 41.6 |
| pfu_aug1.0_5102.1_59699.t1 | 7 | 7 | Cadherin_2 | 723 | 750 | 1.2e-14 | 53.6 | 0.0099 | 37.0 | 3.9 |
Transcript
| Transcript ID | pfu_aug1.0_5102.1_59699.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5102.1_59699.t1 atggcgggagttcgcctcatttttctaaggattatattctttttacactcagtcgcatcactggaactgaattacagcct gcttgaagaaagtgaaccaaatgatcacgtgattggaaatatagcggaagactgcggactattttctttgcttcagaacg ccgatgaccggaagtacatccgctttcaaattctcagcgacagtcctttttcgacattttttcgaataaaccagacttct agtgatttgtataacagtaaaagagtggatagagaatctatagataaatgcacatacgaggacacgtgtttgttacctct tgtagttgtggctcagtccgaatctagtgaattcacattctttcagcaagtatctgtggagatcatagttctggatataa acgataaccctcctttctttcaacaaaatcaaactagtagagacatatcagagtcgtcggtcgtagattctttatttcca ctagacggcgcaaccgacattgacaaaaagaacaacgtcatacagcggtacgagttacttcctcttggctcgccgttttc tttgcgatttacgaactttgtagatggaagttcttcattaagtttggttttagaccaaaaactggacagagaggaggtgg ataaatatgagctacgaattttagcaatagacggtggcacaccagcgctaacgggaacgctaaatctcaccgtaaacgtt cttgatgaaaacgacaacaaaccagttttcgctcaaagcacctacaggataacggtaaatgaaaatgtttctgtaggctc aactatatttaaattaaatgctaccgataaagacatcggtgataacggtaaaatttcgtatcaactaagccgatatcagc cagacgaggtacggagattgtttgctattacggaggatacgggctttctcactacgtctcaatcccttatgtataccccg ggaacagaatacagaataattatcgaggcctccgataacgctcttcaacctctgacatcacaggtggttgtttatgtcag cgtgctcgattcgcttaacgatccaccggaagtacacgttaacttccttaccggaactggaacctctgacattttagaat cgacacgcgtcggctctgccatcgctcatgtcgccgtggatgacaaagatacaggtgaaaatggcgatgtttcgtgtcat ttacaaagcgatatactttacctgcaaataatgagtacaaatgaatacaaaattattttgaattcatctctggatcgaga aactcaggatatttacaacatagttttgatttgtaaagataacggatcgccgtctcttaattctacaaaacgaattacgt tgagagttaccgatgtgaacgataatgctccagagttctcgaaaattacttatttcgctgatgtgtacgaaaataataat gacgctgtcagtgttttcgaagttaaagcgatagatagagacgtcggtgacaacgccaagattcagtatactcttgtgtc cggaaacgatggattttccatagatcaagatacaggagctgtttacgtcaattttcatctcgatcgggaaacgaaaaatg tttacgatttcgttataatggcgtccgactcgggagacccacaaaagtccactctcgtcaatgcacagttaaacatactc gatcgcaatgataacaaacctgtgtttgatttttcgatatacaccttcacagtggaggaaaatagacccgtcggtctgta cgtcggtaatgtctcagccagtgacctagatatcgggctgaatgggaagattgagtatctgttgattcagaacccagaca attatataccattcaggatactacccgatggatctatattcaccactgaagagcttgaccgtgaatcaaatcttaatggg tataatttcaagatatatgcgagagataaaggtactaatgtgtcgctaaatacctcgtgtcatgtgacagtgttcgtatc ggatgtaaatgacaatgctccagcgtttgtatttccgaatgccgaaaattacacccttatcgtaatttatgatgtaccga aaaacagtattgttggaaaaattgaagcactggatagggattttgacatgaatgcgaaagttacgtattcggtgatcaat gaaatcaacaatccggcaacaaaactatttagcgtagatgcagaatcgggggatatttctctcactcaggcactcacacg agacaatatccagcgttatgtgatatctgtgaatgctgaggacagaggaataaacaaaaaacttgaatgtaatcttgaat ctctaagtagatctgagtaa |
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Protein
| Protein ID | pfu_aug1.0_5102.1_59699.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5102.1_59699.t1 MAGVRLIFLRIIFFLHSVASLELNYSLLEESEPNDHVIGNIAEDCGLFSLLQNADDRKYIRFQILSDSPFSTFFRINQTS SDLYNSKRVDRESIDKCTYEDTCLLPLVVVAQSESSEFTFFQQVSVEIIVLDINDNPPFFQQNQTSRDISESSVVDSLFP LDGATDIDKKNNVIQRYELLPLGSPFSLRFTNFVDGSSSLSLVLDQKLDREEVDKYELRILAIDGGTPALTGTLNLTVNV LDENDNKPVFAQSTYRITVNENVSVGSTIFKLNATDKDIGDNGKISYQLSRYQPDEVRRLFAITEDTGFLTTSQSLMYTP GTEYRIIIEASDNALQPLTSQVVVYVSVLDSLNDPPEVHVNFLTGTGTSDILESTRVGSAIAHVAVDDKDTGENGDVSCH LQSDILYLQIMSTNEYKIILNSSLDRETQDIYNIVLICKDNGSPSLNSTKRITLRVTDVNDNAPEFSKITYFADVYENNN DAVSVFEVKAIDRDVGDNAKIQYTLVSGNDGFSIDQDTGAVYVNFHLDRETKNVYDFVIMASDSGDPQKSTLVNAQLNIL DRNDNKPVFDFSIYTFTVEENRPVGLYVGNVSASDLDIGLNGKIEYLLIQNPDNYIPFRILPDGSIFTTEELDRESNLNG YNFKIYARDKGTNVSLNTSCHVTVFVSDVNDNAPAFVFPNAENYTLIVIYDVPKNSIVGKIEALDRDFDMNAKVTYSVIN EINNPATKLFSVDAESGDISLTQALTRDNIQRYVISVNAEDRGINKKLECNLESLSRSE |
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